C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ring finger protein 130
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522208 RNF130-004 ENSG00000113269 9606 - 5:179911651-180071721 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENST00000522208
Transcript ID Brain Testis
ENST00000522208 3.948±1.48 0.730±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054684 Rnf130-002 protein_coding Mus_musculus 0 1679
ENSMUST00000102776 Rnf130-001 protein_coding Mus_musculus 0 1677
ENSMUST00000143607 Rnf130-003 processed_transcript Mus_musculus 0 388
ENSMUST00000140795 Abat-002 retained_intron Mus_musculus 0.000001 62
ENSMUST00000167316 Zfp655-202 protein_coding Mus_musculus 0.00001 58
ENSMUST00000146544 Golga2-011 processed_transcript Mus_musculus 0.0002 55

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