C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAN binding protein 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522380 RANBP17-022 ENSG00000204764 9606 + 5:170919451-170970658 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryTestisENST00000522380
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000522380 0.267±0.00 0.572±0.00 1.537±1.20 0.205±0.00 0.200±0.00 0.214±0.00 0.231±0.00 0.129±0.00 0.651±0.00 6.315±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SG CIL_0008SG_0001 VISTA 5:170690333-171291455
CIL_00098H CIL_00098H_0001 VISTA 5:170731788-171333093
CIL_000977 CIL_000977_0001 VISTA 5:170744249-171345366
CIL_00088M CIL_00088M_0001 VISTA 5:170856489-171457417

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102815 Ranbp17-001 protein_coding Mus_musculus 0 701
ENSMUST00000129179 Ranbp17-002 nonsense_mediated_decay Mus_musculus 0 697

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