C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522439 POLR2K-002 ENSG00000147669 9606 + 8:100150623-100152209 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000522439
Transcript ID Breast
ENST00000522439 2.907±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000O CIL_00000O_0001 CGP 8:100133360-100154002
CIL_000533 CIL_000533_0002 CGP 8:100150584-100259278

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180159 Polr2k-002 protein_coding Mus_musculus 0 235
ENSMUST00000057177 Polr2k-001 protein_coding Mus_musculus 0 230
ENSMUST00000117155 Gm14567-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000120170 Polr2k-ps-001 processed_pseudogene Mus_musculus 0 195

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