C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522496 RP11-117L6.1-001 ENSG00000254256 9606 + 5:171365595-171367693 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000522496
Transcript ID Ovary
ENST00000522496 0.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088M CIL_00088M_0001 VISTA 5:170856489-171457417
CIL_00097F CIL_00097F_0001 VISTA 5:170900986-171503014
CIL_00092S CIL_00092S_0001 VISTA 5:171022159-171623481

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 431

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