C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9083
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120423 Gm9083-001 ENSMUSG00000083033 10090 + X:20239469-20240287 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120423
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120423 0.124±0.02 0.068±0.01 0.157±0.00 0.107±0.02 0.285±0.09 0.177±0.15 0.035±0.00 0.122±0.05 0.047±0.01 0.230±0.05 0.370±0.22 0.071±0.02 0.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G7 CIL_0005G7_0002 CGP X:20059560-20291807
CIL_0005G6 CIL_0005G6_0002 CGP X:20105755-20405653

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000135945 rpsa-001 protein_coding Danio_rerio 0 564
ENST00000301821 RPSA-001 protein_coding Homo_sapiens 0 933
ENST00000354585 RPSAP58-201 protein_coding Homo_sapiens 0 928
ENST00000401872 RP11-506B6.3-001 processed_pseudogene Homo_sapiens 0 767
ENST00000406712 RP3-334F4.1-001 processed_pseudogene Homo_sapiens 0 715
ENST00000412013 RPSAP63-001 processed_pseudogene Homo_sapiens 0 828
ENST00000412542 RP6-105D16.1-001 processed_pseudogene Homo_sapiens 0 830
ENST00000412645 AC016739.1-001 processed_pseudogene Homo_sapiens 0 612
ENST00000414293 RP11-182B22.2-001 transcribed_processed_pseudogene Homo_sapiens 0 769
ENST00000415189 AL160471.6-001 processed_pseudogene Homo_sapiens 0 654
ENST00000416785 RPSAP2-001 processed_pseudogene Homo_sapiens 0 728
ENST00000417882 RPSAP6-001 processed_pseudogene Homo_sapiens 0 743
ENST00000418207 RPSAP9-001 processed_pseudogene Homo_sapiens 0 905
ENST00000421048 RP4-635G19.1-001 processed_pseudogene Homo_sapiens 0 411
ENST00000427417 COMMD1-005 protein_coding Homo_sapiens 0 614
ENST00000428316 RP4-747G18.5-001 processed_pseudogene Homo_sapiens 0 843
ENST00000429143 RPSAP14-001 processed_pseudogene Homo_sapiens 0 372
ENST00000429844 RPSAP8-001 processed_pseudogene Homo_sapiens 0 821
ENST00000431241 RP11-556K13.1-001 processed_pseudogene Homo_sapiens 0 902
ENST00000432681 RPSAP32-001 processed_pseudogene Homo_sapiens 0 396
ENST00000433498 RPSAP53-001 processed_pseudogene Homo_sapiens 0 795
ENST00000435879 RP11-254B13.1-001 processed_pseudogene Homo_sapiens 0 905
ENST00000437188 AC074008.1-001 processed_pseudogene Homo_sapiens 0 675
ENST00000437336 RP11-350G8.3-001 processed_pseudogene Homo_sapiens 0 905
ENST00000442699 AC018462.3-001 processed_pseudogene Homo_sapiens 0 828
ENST00000443003 RPSA-002 protein_coding Homo_sapiens 0 874
ENST00000443010 AC097639.8-001 processed_pseudogene Homo_sapiens 0 806
ENST00000444166 COMMD1-008 protein_coding Homo_sapiens 0 614
ENST00000444599 RP11-366O20.5-001 processed_pseudogene Homo_sapiens 0 793
ENST00000445182 RP11-350G13.1-001 processed_pseudogene Homo_sapiens 0 846
ENST00000446095 RPSAP23-001 processed_pseudogene Homo_sapiens 0 614
ENST00000447583 RP11-533E19.3-001 processed_pseudogene Homo_sapiens 0 606
ENST00000448168 RPSAP15-001 processed_pseudogene Homo_sapiens 0 885
ENST00000454001 RPSAP54-001 processed_pseudogene Homo_sapiens 0 915
ENST00000456871 RP11-398C13.2-001 processed_pseudogene Homo_sapiens 0 750
ENST00000458337 COMMD1-006 protein_coding Homo_sapiens 0 608
ENST00000458478 RPSA-008 protein_coding Homo_sapiens 0 907
ENST00000464073 RP11-187O7.1-001 transcribed_processed_pseudogene Homo_sapiens 0 904
ENST00000465940 RP11-58H15.1-001 transcribed_processed_pseudogene Homo_sapiens 0 702
ENST00000467439 RP11-162K6.1-001 processed_pseudogene Homo_sapiens 0 761
ENST00000470913 RPSAP37-001 processed_pseudogene Homo_sapiens 0 366
ENST00000477347 RPSAP55-001 processed_pseudogene Homo_sapiens 0 765
ENST00000478027 RPSA-003 processed_transcript Homo_sapiens 0 789
ENST00000479228 RPSAP47-001 processed_pseudogene Homo_sapiens 0 911
ENST00000483479 RP11-179A18.1-001 processed_pseudogene Homo_sapiens 0 804
ENST00000484897 RPSAP56-001 processed_pseudogene Homo_sapiens 0 833
ENST00000485258 RP11-600F24.1-001 processed_pseudogene Homo_sapiens 0 774
ENST00000488229 RPSAP4-001 processed_pseudogene Homo_sapiens 0 865
ENST00000489520 RPSAP52-002 processed_transcript Homo_sapiens 0 726
ENST00000493929 RPSAP52-001 transcribed_processed_pseudogene Homo_sapiens 0 726
ENST00000494591 RP11-58H15.1-002 processed_transcript Homo_sapiens 0 702
ENST00000495394 RPSA-004 retained_intron Homo_sapiens 0 307
ENST00000496398 RPSAP58-001 protein_coding Homo_sapiens 0 928
ENST00000502477 RPSAP2-001 processed_pseudogene Homo_sapiens 0 728
ENST00000507015 RPSAP2-001 processed_pseudogene Homo_sapiens 0 723
ENST00000522496 RP11-117L6.1-001 processed_pseudogene Homo_sapiens 0 466
ENST00000590033 RPSAP57-001 processed_pseudogene Homo_sapiens 0 429
ENST00000625020 bP-2168N6.2-001 processed_pseudogene Homo_sapiens 0 318

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