C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523014 RP11-328L11.1-001 ENSG00000253945 9606 + 8:95403802-95403894 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleENST00000523014
Transcript ID Heart Muscle
ENST00000523014 0.219±0.00 1.760±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081987 Rpl36a-ps1-201 processed_pseudogene Mus_musculus 3e-32 139
ENSMUST00000152266 Rpl36a-002 retained_intron Mus_musculus 3e-32 139
ENSMUST00000149857 Rpl36a-005 retained_intron Mus_musculus 3e-32 139
ENSMUST00000170828 Rpl36a-004 nonsense_mediated_decay Mus_musculus 3e-32 139
ENSMUST00000172023 Rpl36a-003 retained_intron Mus_musculus 3e-32 139
ENSMUST00000113211 Rpl36a-001 protein_coding Mus_musculus 3e-32 139
ENSMUST00000116105 Gm11970-001 processed_pseudogene Mus_musculus 2e-30 134

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