C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMG1 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523028 SMG1P4-001 ENSG00000185710 9606 - 16:21879338-21916024 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungENST00000523028
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung
ENST00000523028 0.646±0.00 0.690±0.00 0.795±0.00 0.087±0.00 0.402±0.00 1.745±0.00 0.799±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032891 Smg1-001 protein_coding Mus_musculus 0 5107
ENSMUST00000179331 Smg1-005 protein_coding Mus_musculus 0 4615
ENSMUST00000180009 Smg1-003 retained_intron Mus_musculus 0 1664
ENSMUST00000179047 Smg1-002 protein_coding Mus_musculus 0 1380
ENSMUST00000179847 Smg1-004 retained_intron Mus_musculus 0 1002

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