C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: staufen double-stranded RNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000524104 STAU2-008 ENSG00000040341 9606 - 8:73652257-73746840 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D6 CIL_0001D6_0001 CGP 8:73294612-73747708
CIL_0001NO CIL_0001NO_0001 CGP 8:73420369-73878854

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003725 IDA double-stranded RNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005874 IEA microtubule
GO:0006810 IEA transport
GO:0016020 IDA membrane
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159558 Stau2-016 protein_coding Mus_musculus 0 551
ENSMUST00000162627 Stau2-012 protein_coding Mus_musculus 0 551
ENSMUST00000162435 Stau2-009 protein_coding Mus_musculus 0 542
ENSMUST00000127420 Stau2-005 nonsense_mediated_decay Mus_musculus 0 542
ENSMUST00000162007 Stau2-004 protein_coding Mus_musculus 0 540
ENSMUST00000027052 Stau2-003 protein_coding Mus_musculus 0 540
ENSMUST00000128957 Stau2-006 protein_coding Mus_musculus 0 451
ENSMUST00000162751 Stau2-001 protein_coding Mus_musculus 0 451
ENSMUST00000131257 Stau2-015 protein_coding Mus_musculus 0 451
ENSMUST00000149320 Stau2-014 protein_coding Mus_musculus 0 451
ENSMUST00000054668 Stau2-013 protein_coding Mus_musculus 0 451
ENSMUST00000145092 Stau2-011 protein_coding Mus_musculus 0 318
ENSMUST00000153966 Stau2-008 protein_coding Mus_musculus 0 254
ENSMUST00000151888 Stau2-010 protein_coding Mus_musculus 0 230
ENSMUST00000115359 Stau2-002 protein_coding Mus_musculus 0 228
ENSMUST00000144138 Stau2-017 protein_coding Mus_musculus 0 228

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