C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: aryl hydrocarbon receptor nuclear translocator-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000524392 ARNTL-014 ENSG00000133794 9606 + 11:13374093-13387266 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastENST00000524392
Transcript ID Adrenal Breast
ENST00000524392 1.043±0.00 0.434±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PI CIL_0003PI_0001 CGP 11:13009577-13387266
CIL_0003PJ CIL_0003PJ_0001 CGP 11:13276652-13463297

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047321 Arntl-201 protein_coding Mus_musculus 0 1637
ENSDART00000051823 arntl1b-201 protein_coding Danio_rerio 1e-38 165
ENSDART00000098259 arntl1b-202 protein_coding Danio_rerio 1e-38 165
ENSDART00000139227 arntl1b-001 protein_coding Danio_rerio 1e-38 165
ENSDART00000104523 arntl1b-002 protein_coding Danio_rerio 1e-38 165

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