C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003PI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000189431-ENSG00000133794 CGP 9606 11:13009577-13387266
GeneTranscriptPositionBiotype
ENSG00000133794 (ARNTL)
aryl hydrocarbon receptor nuclear translocator-like 		ENST00000389707 (ARNTL-001) 13277798-13387266 protein_coding
ENST00000401424 (ARNTL-003) 13277798-13387266 protein_coding
ENST00000403290 (ARNTL-004) 13277831-13387266 protein_coding
ENST00000403482 (ARNTL-005) 13356878-13387266 protein_coding
ENST00000403510 (ARNTL-002) 13277842-13387263 protein_coding
ENST00000472842 (ARNTL-006) 13375679-13387263 retained_intron
ENST00000480685 (ARNTL-009) 13277829-13356929 retained_intron
ENST00000482049 (ARNTL-008) 13277885-13358558 protein_coding
ENST00000485918 (ARNTL-021) 13349945-13354631 retained_intron
ENST00000497429 (ARNTL-007) 13358434-13372409 processed_transcript
ENST00000524392 (ARNTL-014) 13374093-13387266 nonsense_mediated_decay
ENST00000527998 (ARNTL-019) 13277639-13358440 protein_coding
ENST00000529050 (ARNTL-016) 13276652-13354377 protein_coding
ENST00000529388 (ARNTL-022) 13277802-13360372 protein_coding
ENST00000529390 (ARNTL-013) 13372209-13376771 retained_intron
ENST00000529825 (ARNTL-017) 13277794-13358481 protein_coding
ENST00000530357 (ARNTL-018) 13277815-13365592 protein_coding
ENST00000531665 (ARNTL-011) 13309986-13357096 protein_coding
ENST00000533520 (ARNTL-020) 13277793-13358514 protein_coding
ENST00000534102 (ARNTL-012) 13365416-13369740 retained_intron
ENST00000534544 (ARNTL-015) 13276652-13356777 protein_coding
ENSG00000189431 (RASSF10)
Ras association (RalGDS/AF-6) domain family (N-terminal) member 10 		ENST00000529419 (RASSF10-001) 13009577-13012106 protein_coding
ENSG00000222162 (RN7SKP151)
RNA, 7SK small nuclear pseudogene 151 		ENST00000410230 (RN7SKP151-201) 13353208-13353523 misc_RNA
CIL_0003PI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000098132-ENSMUSG00000055116 CGP 10090 7:112953962-113314122
GeneTranscriptPositionBiotype
ENSMUSG00000055116 (Arntl)
aryl hydrocarbon receptor nuclear translocator-like 		ENSMUST00000047321 (Arntl-201) 113207465-113314122 protein_coding
ENSMUSG00000088671 (Gm23662)
predicted gene, 23662 		ENSMUST00000158046 (Gm23662-201) 113119698-113119808 rRNA
ENSMUSG00000098132 (Rassf10)
Ras association (RalGDS/AF-6) domain family (N-terminal) member 10 		ENSMUST00000182858 (Rassf10-001) 112953962-112957457 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PI_0001ENSG00000133794ENST00000389707ENST00000401424ENST00000403290ENST00000403482ENST00000403510ENST00000472842ENST00000480685ENST00000482049ENST00000485918ENST00000497429ENST00000524392ENST00000527998ENST00000529050ENST00000529388ENST00000529390ENST00000529825ENST00000530357ENST00000531665ENST00000533520ENST00000534102ENST00000534544ENSG00000189431ENST00000529419ENSG00000222162ENST00000410230CIL_0003PI_0002ENSMUSG00000055116ENSMUST00000047321ENSMUSG00000088671ENSMUST00000158046ENSMUSG00000098132ENSMUST00000182858
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PI_0001ENSG00000133794ENST00000389707ENST00000401424ENST00000403290ENST00000403482ENST00000403510ENST00000472842ENST00000497429ENST00000524392ENST00000529390ENST00000529825ENST00000531665ENST00000533520ENSG00000189431ENST00000529419ENSG00000222162ENST00000410230CIL_0003PI_0002ENSMUSG00000055116ENSMUST00000047321ENSMUSG00000088671ENSMUST00000158046ENSMUSG00000098132ENSMUST00000182858
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133794 ENST00000389707 1.055±0.00 N/A N/A 1.520±0.06 N/A 2.675±0.00 N/A N/A 0.354±0.00 N/A N/A N/A 0.593±0.03 2.911±0.00
ENST00000401424 N/A N/A N/A 1.101±0.00 0.344±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403290 N/A 1.365±0.00 N/A 3.167±0.00 0.589±0.00 0.563±0.00 N/A N/A 2.477±1.87 1.680±0.00 3.727±0.00 1.851±1.04 0.535±0.00 2.118±0.00
ENST00000403482 1.209±0.00 0.480±0.00 0.475±0.00 N/A 0.628±0.00 0.973±0.06 N/A 1.066±0.53 0.325±0.00 1.053±0.25 N/A 0.831±0.38 N/A 1.842±0.00
ENST00000403510 1.288±0.00 N/A N/A 1.719±0.00 N/A N/A 0.598±0.00 N/A 3.427±0.00 N/A N/A 1.140±0.00 0.456±0.15 N/A
ENST00000472842 N/A 0.428±0.00 N/A 0.890±0.00 0.183±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497429 N/A N/A N/A N/A 0.975±0.00 N/A N/A N/A 1.068±0.00 N/A 0.732±0.00 N/A N/A N/A
ENST00000524392 N/A 1.043±0.00 N/A N/A 0.434±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.169±0.00 2.405±0.00 12.198±0.00
ENST00000529825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.069±0.00 N/A
ENST00000530357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.476±0.00 N/A N/A N/A
ENST00000533520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.183±0.00 2.362±0.00 12.096±0.00
ENST00000534102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000189431 ENST00000529419 0.089±0.00 1.331±0.00 1.396±0.00 0.286±0.11 1.096±0.99 0.090±0.05 0.171±0.04 2.433±0.00 0.151±0.00 0.313±0.00 0.244±0.00 1.493±1.64 0.087±0.05 0.782±0.22
ENSG00000222162 ENST00000410230 N/A 0.447±0.00 N/A 0.731±0.55 N/A 0.234±0.00 N/A 0.223±0.00 N/A 1.632±0.00 0.888±0.00 0.736±0.56 N/A 0.171±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000055116 ENSMUST00000047321 5.006±1.48 2.680±1.22 1.029±0.15 4.801±0.51 3.360±0.50 8.475±1.27 3.666±1.54 3.182±0.34 4.550±2.05 5.194±1.99 5.367±3.37 2.742±0.86 4.365±1.95 1.148±0.32
ENSMUSG00000088671 ENSMUST00000158046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.372±0.00
ENSMUSG00000098132 ENSMUST00000182858 1.686±0.84 1.558±0.35 0.301±0.03 0.639±0.27 1.349±0.43 1.058±0.08 0.467±0.03 1.213±0.17 0.023±0.02 1.305±0.20 0.186±0.05 2.935±1.01 0.558±0.52 0.498±0.11

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