C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycosylphosphatidylinositol anchor attachment 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526233 GPAA1-019 ENSG00000197858 9606 + 8:144083989-144084849 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonLungOvaryTestisENST00000526233
Transcript ID Adipose Breast Colon Lung Ovary Testis
ENST00000526233 30.965±0.00 43.535±0.00 14.328±0.00 1.260±0.00 54.907±0.00 34.524±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0001 VISTA 8:143880613-144482307
CIL_00026Y CIL_00026Y_0001 CGP 8:144078626-144086216
CIL_00026V CIL_00026V_0001 CGP 8:144082590-144097525

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172281 Gpaa1-002 protein_coding Mus_musculus 0 534
ENSMUST00000164972 Gpaa1-003 nonsense_mediated_decay Mus_musculus 0 534
ENSMUST00000023221 Gpaa1-001 protein_coding Mus_musculus 0 534
ENSMUST00000171005 Gpaa1-007 retained_intron Mus_musculus 0 392
ENSMUST00000164680 Gpaa1-005 retained_intron Mus_musculus 0 392

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