C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526258 KDM2A-004 ENSG00000173120 9606 + 11:67207602-67257661 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000526258
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000526258 5.101±0.00 7.691±0.00 2.512±0.00 5.956±0.00 3.186±0.00 3.182±0.00 3.348±0.00 7.742±0.00 3.461±2.04 4.375±1.58 3.094±1.59 8.784±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075856 Kdm2a-201 protein_coding Mus_musculus 0 5594
ENSMUST00000047898 Kdm2a-001 protein_coding Mus_musculus 0 5594
ENSMUST00000116571 Kdm2a-005 protein_coding Mus_musculus 0 1317
ENSMUST00000176653 Kdm2a-008 protein_coding Mus_musculus 0 959
ENSMUST00000176532 Kdm2a-010 nonsense_mediated_decay Mus_musculus 0 756
ENSMUST00000175777 Kdm2a-004 retained_intron Mus_musculus 0 701
ENSMUST00000175978 Kdm2a-009 retained_intron Mus_musculus 0 691
ENSMUST00000175959 Kdm2a-007 protein_coding Mus_musculus 0 623
ENSMUST00000175682 Kdm2a-003 retained_intron Mus_musculus 0 433
ENSMUST00000176497 Kdm2a-011 nonsense_mediated_decay Mus_musculus 3e-40 172

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