C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scribbled planar cell polarity protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526832 SCRIB-004 ENSG00000180900 9606 - 8:143790925-143804151 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000526832
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000526832 4.030±0.00 6.386±0.00 6.635±0.00 5.418±0.00 3.847±0.00 3.894±0.00 18.183±0.00 5.644±0.43 7.129±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0001 VISTA 8:143231340-143832399
CIL_0002GT CIL_0002GT_0001 CGP 8:143790920-143829859

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109946 Scrib-002 protein_coding Mus_musculus 0 1040
ENSMUST00000063747 Scrib-003 protein_coding Mus_musculus 0 1040
ENSMUST00000002603 Scrib-001 protein_coding Mus_musculus 0 848
ENSMUST00000136390 Scrib-004 protein_coding Mus_musculus 0 848

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