C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527147 AP000620.1-001 ENSG00000255059 9606 + 11:100666459-100666962 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonMuscleTestisENST00000527147
Transcript ID Brain Breast Colon Muscle Testis
ENST00000527147 0.086±0.02 0.118±0.00 0.030±0.00 0.028±0.00 0.153±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 632
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 623
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 610
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 588
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 577
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 553
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 536
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 523
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 508
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 278

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