C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 1-aminocyclopropane-1-carboxylate synthase (non-functional)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068513 Accs-003 ENSMUSG00000040272 10090 - 2:93835438-93849679 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068513
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068513 2.668±0.27 2.150±0.53 1.394±1.03 2.450±0.16 1.128±0.33 1.137±0.40 1.812±0.55 0.832±0.36 2.060±0.40 0.657±0.14 2.226±0.73 0.918±0.44 0.294±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UN CIL_0008UN_0002 VISTA 2:93370139-93973617

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0009058 IEA biosynthetic process
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263776 ACCS-001 protein_coding Homo_sapiens 0 1434
ENST00000524990 ACCS-005 protein_coding Homo_sapiens 0 355
ENST00000526577 ACCS-008 retained_intron Homo_sapiens 0 538
ENST00000527346 ACCS-004 retained_intron Homo_sapiens 0 660
ENST00000531505 ACCS-009 retained_intron Homo_sapiens 0 285
ENST00000534035 ACCS-012 retained_intron Homo_sapiens 0 411

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