C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 1-aminocyclopropane-1-carboxylate synthase (non-functional)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111246 Accs-001 ENSMUSG00000040272 10090 - 2:93833467-93849941 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111246
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111246 1.417±0.40 0.647±0.19 1.245±0.21 1.312±0.63 0.881±0.12 0.388±0.03 0.478±0.19 0.896±0.30 0.417±0.11 1.442±0.01 0.269±0.01 1.175±0.28 0.351±0.06 0.092±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UN CIL_0008UN_0002 VISTA 2:93370139-93973617

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0009058 IEA biosynthetic process
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263776 ACCS-001 protein_coding Homo_sapiens 0 1432
ENST00000524990 ACCS-005 protein_coding Homo_sapiens 0 359
ENST00000526577 ACCS-008 retained_intron Homo_sapiens 0 536
ENST00000527346 ACCS-004 retained_intron Homo_sapiens 0 660
ENST00000531505 ACCS-009 retained_intron Homo_sapiens 0 285
ENST00000534035 ACCS-012 retained_intron Homo_sapiens 0 411

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