C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 47
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527733 USP47-002 ENSG00000170242 9606 + 11:11841975-11956421 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000527733
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000527733 9.439±0.00 7.992±0.00 3.757±0.00 3.076±0.47 7.617±0.59 7.253±0.37 4.254±1.32 6.196±0.33 7.187±1.89 7.000±0.62 8.863±7.71 8.910±4.08 9.196±6.28 24.800±12.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HU CIL_0001HU_0002 CGP 11:11841423-12009769

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0006284 IMP base-excision repair
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0010972 IMP negative regulation of G2/M transition of mitotic cell cycle
GO:0019005 IDA SCF ubiquitin ligase complex
GO:0030307 IMP positive regulation of cell growth
GO:0034644 ISS cellular response to UV
GO:0035520 IDA monoubiquitinated protein deubiquitination
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0042493 IMP response to drug
GO:0043066 IMP negative regulation of apoptotic process
GO:0043154 IMP negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0071987 IPI WD40-repeat domain binding
GO:1902230 IEA negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106653 Usp47-201 protein_coding Mus_musculus 0 5598

Loading