C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: autophagy/beclin-1 regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528950 AMBRA1-007 ENSG00000110497 9606 - 11:46397450-46594045 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryENST00000528950
Transcript ID Brain Liver Ovary
ENST00000528950 0.872±0.00 0.726±0.00 0.561±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LK CIL_0002LK_0002 CGP 11:46385098-46594125

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005930 ISS axoneme
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111317 Ambra1-201 protein_coding Mus_musculus 0 3797
ENSMUST00000045699 Ambra1-004 protein_coding Mus_musculus 0 3797
ENSMUST00000124132 Ambra1-005 processed_transcript Mus_musculus 0 3339
ENSMUST00000156496 Ambra1-007 processed_transcript Mus_musculus 0 3033
ENSMUST00000111316 Ambra1-003 protein_coding Mus_musculus 0 3033
ENSMUST00000045705 Ambra1-002 protein_coding Mus_musculus 0 3033
ENSMUST00000099712 Ambra1-001 protein_coding Mus_musculus 0 2344
ENSMUST00000133490 Ambra1-006 processed_transcript Mus_musculus 0 682
ENSMUST00000142224 Ambra1-008 processed_transcript Mus_musculus 0 287

Loading