C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002LK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069254-ENSDARG00000008322 CGP 7955 7:40573962-40749735
GeneTranscriptPositionBiotype
ENSDARG00000008322 (AMBRA1 (1 of 2))
autophagy/beclin-1 regulator 1 		ENSDART00000098033 (AMBRA1 (1 of 2)-201) 40648781-40749735 protein_coding
ENSDARG00000069254 (chrm4a)
cholinergic receptor, muscarinic 4a 		ENSDART00000100639 (chrm4a-201) 40573962-40595563 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0002LK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180720-ENSG00000110497 CGP 9606 11:46385098-46594125
GeneTranscriptPositionBiotype
ENSG00000110497 (AMBRA1)
autophagy/beclin-1 regulator 1 		ENST00000314845 (AMBRA1-006) 46396414-46591364 protein_coding
ENST00000458649 (AMBRA1-005) 46396415-46591423 protein_coding
ENST00000524783 (AMBRA1-014) 46546071-46547420 processed_transcript
ENST00000526545 (AMBRA1-011) 46397384-46417995 protein_coding
ENST00000526606 (AMBRA1-008) 46548309-46594125 protein_coding
ENST00000528950 (AMBRA1-007) 46397450-46594045 protein_coding
ENST00000529553 (AMBRA1-012) 46434849-46493893 retained_intron
ENST00000529558 (AMBRA1-010) 46504479-46530607 processed_transcript
ENST00000529963 (AMBRA1-013) 46490998-46495511 processed_transcript
ENST00000531542 (AMBRA1-009) 46545701-46593998 processed_transcript
ENST00000533727 (AMBRA1-002) 46396414-46593948 protein_coding
ENST00000534300 (AMBRA1-001) 46396414-46594021 protein_coding
ENSG00000180720 (CHRM4)
cholinergic receptor, muscarinic 4 		ENST00000433765 (CHRM4-001) 46385098-46386608 protein_coding
ENSG00000244313 (RP11-425L10.1)
 ENST00000467930 (RP11-425L10.1-001) 46428653-46429150 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LK_0001ENSDARG00000008322ENSDART00000098033ENSDARG00000069254ENSDART00000100639CIL_0002LK_0002ENSG00000110497ENST00000314845ENST00000458649ENST00000524783ENST00000526545ENST00000526606ENST00000528950ENST00000529553ENST00000529558ENST00000529963ENST00000531542ENST00000533727ENST00000534300ENSG00000180720ENST00000433765ENSG00000244313ENST00000467930
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LK_0001ENSDARG00000008322ENSDART00000098033ENSDARG00000069254ENSDART00000100639CIL_0002LK_0002ENSG00000110497ENST00000314845ENST00000458649ENST00000526545ENST00000528950ENST00000533727ENST00000534300ENSG00000180720ENST00000433765ENSG00000244313ENST00000467930
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008322 ENSDART00000098033 N/A N/A N/A 1.189±0.00 N/A N/A 0.852±0.31 N/A 0.588±0.00 N/A N/A N/A N/A N/A
ENSDARG00000069254 ENSDART00000100639 N/A N/A N/A 6.220±0.00 N/A N/A N/A 0.045±0.00 0.023±0.00 N/A 1.010±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110497 ENST00000314845 N/A N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A N/A
ENST00000458649 N/A N/A 0.427±0.00 2.211±0.00 2.011±0.00 1.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526545 N/A N/A N/A N/A N/A N/A N/A 1.432±0.00 N/A N/A N/A N/A N/A N/A
ENST00000526606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528950 N/A N/A N/A 0.872±0.00 N/A N/A N/A N/A 0.726±0.00 N/A N/A 0.561±0.00 N/A N/A
ENST00000529553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533727 1.989±0.00 2.295±0.00 0.459±0.00 2.928±1.33 1.390±0.00 2.612±0.00 1.860±0.00 2.152±0.00 N/A 1.932±0.00 2.713±0.00 3.129±0.80 2.094±0.90 2.466±0.00
ENST00000534300 N/A N/A N/A 1.903±0.00 N/A 0.600±0.00 0.537±0.00 N/A N/A 2.262±0.00 N/A 1.008±0.00 1.182±0.21 2.599±0.00
ENSG00000180720 ENST00000433765 N/A 0.076±0.00 N/A N/A 0.254±0.00 0.422±0.00 N/A 0.020±0.00 N/A 0.072±0.00 0.016±0.00 0.129±0.00 0.119±0.03 5.680±0.00
ENSG00000244313 ENST00000467930 N/A N/A N/A N/A 0.382±0.34 0.265±0.00 N/A 0.162±0.00 0.176±0.00 N/A N/A 0.559±0.53 0.379±0.25 0.040±0.00

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