C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy/beclin 1 regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045705 Ambra1-002 ENSMUSG00000040506 10090 + 2:91730225-91918849 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045705
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045705 3.771±0.94 2.120±0.28 6.062±3.59 2.968±1.20 1.867±0.55 2.469±0.45 0.843±0.24 2.618±1.30 1.536±0.51 3.898±1.38 3.097±1.41 3.843±1.24

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 ISA cytoplasm
GO:0005930 IDA axoneme
GO:0006914 IMP autophagy
GO:0008285 IMP negative regulation of cell proliferation
GO:0021915 IMP neural tube development
GO:0030154 IEA cell differentiation
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0045335 IDA phagocytic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314845 AMBRA1-006 protein_coding Homo_sapiens 0 4150
ENST00000458649 AMBRA1-005 protein_coding Homo_sapiens 0 5786
ENST00000524783 AMBRA1-014 processed_transcript Homo_sapiens 0 276
ENST00000526545 AMBRA1-011 protein_coding Homo_sapiens 0 808
ENST00000528950 AMBRA1-007 protein_coding Homo_sapiens 0 3033
ENST00000529553 AMBRA1-012 retained_intron Homo_sapiens 0 640
ENST00000529558 AMBRA1-010 processed_transcript Homo_sapiens 0 460
ENST00000529963 AMBRA1-013 processed_transcript Homo_sapiens 0 287
ENST00000531542 AMBRA1-009 processed_transcript Homo_sapiens 0 420
ENST00000533727 AMBRA1-002 protein_coding Homo_sapiens 0 2540
ENST00000534300 AMBRA1-001 protein_coding Homo_sapiens 0 3290

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