C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 9 superfamily member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530611 TM9SF1-001 ENSG00000254692 9606 - 14:24189157-24213473 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaENST00000530611
Transcript ID Liver Placenta
ENST00000530611 4.750±0.00 47.019±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029E CIL_00029E_0001 CGP 14:24189157-24213473

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005764 IEA lysosome
GO:0006914 IEA autophagy
GO:0007034 IEA vacuolar transport
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122358 Tm9sf1-001 protein_coding Mus_musculus 0 2802
ENSMUST00000120041 Tm9sf1-004 protein_coding Mus_musculus 0 2800
ENSMUST00000121791 Tm9sf1-008 protein_coding Mus_musculus 0 2776
ENSMUST00000002391 Tm9sf1-002 protein_coding Mus_musculus 0 2721
ENSMUST00000132338 Tm9sf1-007 protein_coding Mus_musculus 0 2085
ENSMUST00000121937 Tm9sf1-003 protein_coding Mus_musculus 0 2002
ENSMUST00000149726 Tm9sf1-005 nonsense_mediated_decay Mus_musculus 0 1679
ENSMUST00000127473 Tm9sf1-006 retained_intron Mus_musculus 0 1399
ENSMUST00000146588 Tm9sf1-012 retained_intron Mus_musculus 0 1077
ENSMUST00000156420 Ipo4-013 processed_transcript Mus_musculus 0 776
ENSMUST00000138085 Tm9sf1-009 protein_coding Mus_musculus 0 763
ENSMUST00000139313 Tm9sf1-010 processed_transcript Mus_musculus 0 651
ENSMUST00000133707 Tm9sf1-011 protein_coding Mus_musculus 0 527
ENSMUST00000130167 Tm9sf1-013 processed_transcript Mus_musculus 0 446

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