C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: importin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156420 Ipo4-013 ENSMUSG00000002319 10090 - 14:55625896-55637895 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000156420
Transcript ID Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000156420 7.381±0.98 3.981±0.00 5.673±0.03 4.184±0.00 17.495±3.95 7.690±0.00 8.274±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028R CIL_00028R_0002 CGP 14:55618037-55637895

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261789 TM9SF1-002 protein_coding Homo_sapiens 0 795
ENST00000354464 IPO4-001 protein_coding Homo_sapiens 0 2963
ENST00000524835 TM9SF1-003 protein_coding Homo_sapiens 0 662
ENST00000528669 TM9SF1-005 protein_coding Homo_sapiens 0 732
ENST00000529332 TM9SF1-004 nonsense_mediated_decay Homo_sapiens 0 747
ENST00000530611 TM9SF1-001 protein_coding Homo_sapiens 0 776
ENST00000532632 TM9SF1-012 protein_coding Homo_sapiens 0 477
ENST00000558046 IPO4-009 nonsense_mediated_decay Homo_sapiens 0 2819
ENST00000558193 IPO4-021 retained_intron Homo_sapiens 3.00004e-41 172
ENST00000558718 IPO4-016 retained_intron Homo_sapiens 0 326
ENST00000558780 IPO4-004 nonsense_mediated_decay Homo_sapiens 0 2815
ENST00000559253 IPO4-018 nonsense_mediated_decay Homo_sapiens 2.00386e-43 180
ENST00000559588 IPO4-002 retained_intron Homo_sapiens 0 2881
ENST00000559635 IPO4-017 retained_intron Homo_sapiens 5.00264e-43 178
ENST00000560155 IPO4-003 nonsense_mediated_decay Homo_sapiens 0 2887
ENST00000560798 IPO4-011 retained_intron Homo_sapiens 0 2806
ENST00000561090 IPO4-010 retained_intron Homo_sapiens 0 2852
ENST00000561199 IPO4-008 retained_intron Homo_sapiens 0 1310
ENST00000561419 RP11-468E2.2-001 nonsense_mediated_decay Homo_sapiens 0 2963

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