C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 9 superfamily member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002391 Tm9sf1-002 ENSMUSG00000002320 10090 - 14:55636060-55643340 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000002391
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000002391 29.055±9.31 75.561±6.60 13.854±0.85 9.899±0.00 31.430±12.16 66.920±4.78 10.262±1.16 23.427±3.40 20.597±3.38 27.186±3.76 7.200±1.43 52.968±19.22 21.357±7.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028R CIL_00028R_0002 CGP 14:55618037-55637895
CIL_00029E CIL_00029E_0002 CGP 14:55635965-55652539

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005764 IEA lysosome
GO:0006914 IEA autophagy
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261789 TM9SF1-002 protein_coding Homo_sapiens 0 2717
ENST00000396854 TM9SF1-001 protein_coding Homo_sapiens 0 2087
ENST00000524835 TM9SF1-003 protein_coding Homo_sapiens 0 2383
ENST00000525592 TM9SF1-007 protein_coding Homo_sapiens 0 1042
ENST00000528010 TM9SF1-009 protein_coding Homo_sapiens 0 924
ENST00000528669 TM9SF1-005 protein_coding Homo_sapiens 0 2032
ENST00000528895 TM9SF1-011 protein_coding Homo_sapiens 0 1291
ENST00000529332 TM9SF1-004 nonsense_mediated_decay Homo_sapiens 0 1681
ENST00000530468 TM9SF1-010 protein_coding Homo_sapiens 0 1123
ENST00000530563 TM9SF1-008 protein_coding Homo_sapiens 0 955
ENST00000530611 TM9SF1-001 protein_coding Homo_sapiens 0 2721
ENST00000531406 TM9SF1-006 retained_intron Homo_sapiens 0 944
ENST00000532632 TM9SF1-012 protein_coding Homo_sapiens 0 518
ENST00000561419 RP11-468E2.2-001 nonsense_mediated_decay Homo_sapiens 0 693

Loading