C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00029E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000254692-ENSG00000254692 CGP 9606 14:24189157-24213473
GeneTranscriptPositionBiotype
ENSG00000100926 (TM9SF1)
transmembrane 9 superfamily member 1 		ENST00000261789 (TM9SF1-002) 24189143-24195687 protein_coding
ENST00000396854 (TM9SF1-001) 24190042-24195618 protein_coding
ENST00000524835 (TM9SF1-003) 24189401-24195637 protein_coding
ENST00000525592 (TM9SF1-007) 24192888-24195687 protein_coding
ENST00000528010 (TM9SF1-009) 24192985-24195587 protein_coding
ENST00000528669 (TM9SF1-005) 24189149-24195408 protein_coding
ENST00000528895 (TM9SF1-011) 24192713-24195350 protein_coding
ENST00000529332 (TM9SF1-004) 24189192-24195453 nonsense_mediated_decay
ENST00000530468 (TM9SF1-010) 24192843-24195584 protein_coding
ENST00000530563 (TM9SF1-008) 24192731-24195334 protein_coding
ENST00000531406 (TM9SF1-006) 24191734-24193113 retained_intron
ENST00000532632 (TM9SF1-012) 24189537-24195417 protein_coding
ENSG00000139908 (TSSK4)
testis-specific serine kinase 4 		ENST00000287913 (TSSK4-001) 24205756-24208248 protein_coding
ENST00000339917 (TSSK4-002) 24205720-24208246 protein_coding
ENST00000428351 (TSSK4-006) 24205858-24208248 protein_coding
ENST00000553766 (TSSK4-005) 24207256-24208362 protein_coding
ENST00000554420 (TSSK4-004) 24205697-24208248 retained_intron
ENST00000555092 (TSSK4-007) 24205941-24208248 protein_coding
ENST00000556621 (TSSK4-003) 24205728-24208203 protein_coding
ENSG00000254692 (TM9SF1)
transmembrane 9 superfamily member 1 		ENST00000530611 (TM9SF1-001) 24189157-24213473 protein_coding
ENSG00000276698 (RP11-468E2.10)
 ENST00000610486 (RP11-468E2.10-001) 24198433-24199090 lincRNA
ENSG00000278784 (RP11-468E2.11)
 ENST00000619226 (RP11-468E2.11-001) 24201612-24202811 sense_intronic
CIL_00029E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002320-ENSMUSG00000007591 CGP 10090 14:55635965-55652539
GeneTranscriptPositionBiotype
ENSMUSG00000002319 (Ipo4)
importin 4 		ENSMUST00000047131 (Ipo4-001) 55625400-55635684 protein_coding
ENSMUST00000125133 (Ipo4-004) 55634048-55635569 retained_intron
ENSMUST00000126064 (Ipo4-008) 55627298-55627924 retained_intron
ENSMUST00000127773 (Ipo4-007) 55628783-55630660 retained_intron
ENSMUST00000135221 (Ipo4-002) 55625740-55635957 nonsense_mediated_decay
ENSMUST00000141499 (Ipo4-010) 55625724-55627390 retained_intron
ENSMUST00000141848 (Ipo4-011) 55625716-55626432 retained_intron
ENSMUST00000146528 (Ipo4-012) 55625722-55626417 processed_transcript
ENSMUST00000148351 (Ipo4-003) 55625634-55635631 nonsense_mediated_decay
ENSMUST00000148942 (Ipo4-005) 55633757-55635210 retained_intron
ENSMUST00000150951 (Ipo4-006) 55632928-55633658 retained_intron
ENSMUST00000155464 (Ipo4-009) 55625719-55627563 processed_transcript
ENSMUST00000156420 (Ipo4-013) 55625896-55637895 processed_transcript
ENSMUSG00000002320 (Tm9sf1)
transmembrane 9 superfamily member 1 		ENSMUST00000002391 (Tm9sf1-002) 55636060-55643340 protein_coding
ENSMUST00000120041 (Tm9sf1-004) 55635965-55643251 protein_coding
ENSMUST00000121791 (Tm9sf1-008) 55636012-55643354 protein_coding
ENSMUST00000121937 (Tm9sf1-003) 55635968-55643315 protein_coding
ENSMUST00000122358 (Tm9sf1-001) 55635965-55643806 protein_coding
ENSMUST00000127473 (Tm9sf1-006) 55640096-55643371 retained_intron
ENSMUST00000130167 (Tm9sf1-013) 55638301-55641060 processed_transcript
ENSMUST00000132338 (Tm9sf1-007) 55637833-55643523 protein_coding
ENSMUST00000133707 (Tm9sf1-011) 55642584-55643333 protein_coding
ENSMUST00000138085 (Tm9sf1-009) 55641418-55643771 protein_coding
ENSMUST00000139313 (Tm9sf1-010) 55640385-55643560 processed_transcript
ENSMUST00000146588 (Tm9sf1-012) 55640444-55641599 retained_intron
ENSMUST00000149726 (Tm9sf1-005) 55636016-55643361 nonsense_mediated_decay
ENSMUSG00000007591 (Tssk4)
testis-specific serine kinase 4 		ENSMUST00000007735 (Tssk4-201) 55650184-55652539 protein_coding
ENSMUST00000164809 (Tssk4-202) 55650182-55652539 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029E_0001ENSG00000100926ENST00000261789ENST00000396854ENST00000524835ENST00000525592ENST00000528010ENST00000528669ENST00000528895ENST00000529332ENST00000530468ENST00000530563ENST00000531406ENST00000532632ENSG00000139908ENST00000287913ENST00000339917ENST00000428351ENST00000553766ENST00000554420ENST00000555092ENST00000556621ENSG00000254692ENST00000530611ENSG00000276698ENST00000610486ENSG00000278784ENST00000619226CIL_00029E_0002ENSMUSG00000002319ENSMUST00000047131ENSMUST00000125133ENSMUST00000126064ENSMUST00000127773ENSMUST00000135221ENSMUST00000141499ENSMUST00000141848ENSMUST00000146528ENSMUST00000148351ENSMUST00000148942ENSMUST00000150951ENSMUST00000155464ENSMUST00000156420ENSMUSG00000002320ENSMUST00000002391ENSMUST00000120041ENSMUST00000121791ENSMUST00000121937ENSMUST00000122358ENSMUST00000127473ENSMUST00000130167ENSMUST00000132338ENSMUST00000133707ENSMUST00000138085ENSMUST00000139313ENSMUST00000146588ENSMUST00000149726ENSMUSG00000007591ENSMUST00000007735ENSMUST00000164809
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029E_0001ENSG00000100926ENST00000261789ENST00000524835ENSG00000139908ENST00000287913ENST00000339917ENST00000428351ENST00000553766ENST00000554420ENST00000555092ENST00000556621ENSG00000254692ENST00000530611ENSG00000276698ENST00000610486ENSG00000278784ENST00000619226CIL_00029E_0002ENSMUSG00000002319ENSMUST00000047131ENSMUST00000125133ENSMUST00000127773ENSMUST00000135221ENSMUST00000148351ENSMUST00000156420ENSMUSG00000002320ENSMUST00000002391ENSMUST00000120041ENSMUST00000121791ENSMUSG00000007591ENSMUST00000007735ENSMUST00000164809
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100926 ENST00000261789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 61.789±0.00 N/A N/A
ENST00000396854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524835 N/A N/A N/A N/A N/A N/A N/A N/A 45.965±0.00 N/A N/A N/A N/A N/A
ENST00000525592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139908 ENST00000287913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.200±0.00 N/A N/A
ENST00000339917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.174±0.00
ENST00000428351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.202±0.12 N/A
ENST00000553766 N/A N/A N/A 0.259±0.00 N/A N/A N/A N/A 0.077±0.00 N/A N/A 0.592±0.31 0.145±0.08 N/A
ENST00000554420 N/A 1.178±0.00 N/A 0.984±0.39 0.781±0.31 0.430±0.23 0.413±0.00 0.937±0.00 0.504±0.48 0.253±0.23 N/A 1.283±0.55 0.477±0.39 3.299±1.32
ENST00000555092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A
ENST00000556621 N/A N/A N/A N/A N/A N/A 0.132±0.00 N/A N/A 0.420±0.10 N/A N/A N/A 8.437±1.27
ENSG00000254692 ENST00000530611 N/A N/A N/A N/A N/A N/A N/A N/A 4.750±0.00 N/A N/A N/A 47.019±0.00 N/A
ENSG00000276698 ENST00000610486 0.880±0.00 2.513±0.00 1.085±0.00 1.800±0.03 0.634±0.26 0.811±0.15 0.462±0.23 1.769±0.00 0.922±0.00 0.894±0.40 1.185±0.00 1.317±0.49 0.749±0.47 0.814±0.02
ENSG00000278784 ENST00000619226 1.539±0.00 7.172±0.00 1.681±0.00 3.044±2.05 2.657±0.82 2.044±0.58 0.850±0.19 2.398±0.93 1.188±0.13 1.545±0.37 0.420±0.09 2.389±1.07 0.752±0.28 2.821±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002319 ENSMUST00000047131 35.815±8.99 37.214±7.01 14.921±2.02 18.885±3.49 22.886±3.46 19.820±1.48 10.196±2.30 15.335±2.95 10.934±1.87 16.743±0.85 9.076±2.22 45.577±11.49 24.289±5.73 145.805±10.90
ENSMUST00000125133 N/A 101.993±0.95 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127773 N/A N/A N/A 37.909±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 82.304±0.00
ENSMUST00000135221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.303±0.00 N/A N/A N/A
ENSMUST00000141499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.017±0.34 12.247±1.32 11.695±0.00 N/A
ENSMUST00000148942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156420 N/A N/A N/A N/A 7.381±0.98 N/A 3.981±0.00 5.673±0.03 4.184±0.00 N/A N/A 17.495±3.95 7.690±0.00 8.274±0.00
ENSMUSG00000002320 ENSMUST00000002391 29.055±9.31 75.561±6.60 13.854±0.85 9.899±0.00 31.430±12.16 66.920±4.78 10.262±1.16 23.427±3.40 20.597±3.38 27.186±3.76 7.200±1.43 52.968±19.22 21.357±7.97 N/A
ENSMUST00000120041 15.474±0.01 N/A 9.783±0.55 N/A 21.500±1.73 19.612±0.00 12.977±2.67 28.863±2.00 13.459±3.12 22.826±2.82 N/A 16.914±4.26 15.404±3.00 N/A
ENSMUST00000121791 N/A N/A N/A N/A N/A N/A N/A N/A 16.295±0.88 N/A N/A 16.299±0.00 N/A N/A
ENSMUST00000121937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000122358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000007591 ENSMUST00000007735 0.094±0.01 0.367±0.09 N/A 0.098±0.07 0.202±0.09 0.824±0.12 0.095±0.00 0.180±0.03 0.094±0.03 0.161±0.04 0.084±0.04 0.318±0.14 0.160±0.07 42.488±6.82
ENSMUST00000164809 N/A 0.361±0.00 0.461±0.21 0.469±0.00 N/A 0.388±0.00 0.033±0.00 0.207±0.13 0.216±0.08 0.228±0.15 0.072±0.02 0.292±0.23 0.306±0.11 10.223±1.39

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