C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530952 AP000662.9-001 ENSG00000213592 9606 - 11:57718044-57718530 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLungOvaryPlacentaTestisENST00000530952
Transcript ID Adrenal Brain Breast Colon Lung Ovary Placenta Testis
ENST00000530952 0.297±0.00 0.209±0.00 0.487±0.42 0.770±0.53 0.126±0.00 0.534±0.65 0.130±0.00 0.030±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 623
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 599
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 584
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 580
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 577
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 562
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 556
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 545
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 521
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 490
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 4.06377e-44 182

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