C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tousled-like kinase 2 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530992 TLK2P1-001 ENSG00000226049 9606 - 17:34036681-34039872 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverLungOvaryTestisENST00000530992
Transcript ID Bladder Brain Breast Heart Kidney Liver Lung Ovary Testis
ENST00000530992 0.036±0.00 0.256±0.20 0.007±0.00 0.016±0.00 0.056±0.00 0.043±0.00 0.041±0.04 0.072±0.04 0.115±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074A CIL_00074A_0001 CGP 17:32970376-34174964
CIL_0008U5 CIL_0008U5_0001 VISTA 17:33450500-34051658

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106941 Tlk2-006 protein_coding Mus_musculus 0 4442
ENSMUST00000106939 Tlk2-001 protein_coding Mus_musculus 0 3912
ENSMUST00000126175 Tlk2-003 nonsense_mediated_decay Mus_musculus 0 3910
ENSMUST00000015107 Tlk2-008 protein_coding Mus_musculus 0 3910
ENSMUST00000092537 Tlk2-002 protein_coding Mus_musculus 0 2885
ENSMUST00000145048 Tlk2-009 protein_coding Mus_musculus 0 2015
ENSMUST00000146910 Tlk2-007 processed_transcript Mus_musculus 0 905
ENSDART00000141937 tlk2-001 protein_coding Danio_rerio 0 889
ENSDART00000006490 tlk2-002 protein_coding Danio_rerio 0 889
ENSMUST00000152404 Tlk2-005 protein_coding Mus_musculus 0 830
ENSMUST00000120609 Gm13161-001 processed_pseudogene Mus_musculus 0 708
ENSMUST00000120042 Gm13240-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000117481 Gm13243-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000121771 Gm13168-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000149459 Tlk2-011 protein_coding Mus_musculus 0 392
ENSMUST00000126054 Tlk2-010 retained_intron Mus_musculus 0 366
ENSMUST00000121481 Gm13162-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000123050 Tlk2-004 retained_intron Mus_musculus 0 340
ENSMUST00000134419 Tlk2-012 retained_intron Mus_musculus 0 333

Loading