C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit M
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531120 EIF3M-001 ENSG00000149100 9606 + 11:32583825-32606262 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000531120
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000531120 2.479±0.00 0.740±0.00 2.986±0.01 1.249±0.00 0.765±0.00 1.119±0.41 1.154±0.37 2.302±0.00 2.400±0.00 0.381±0.00 3.289±1.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004RH CIL_0004RH_0002 CGP 11:32387775-32606262
CIL_0008SB CIL_0008SB_0001 VISTA 11:32486574-33087503

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001731 IEA formation of translation preinitiation complex
GO:0002183 IBA cytoplasmic translational initiation
GO:0003743 IC translation initiation factor activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005852 IDA eukaryotic translation initiation factor 3 complex
GO:0006412 IEA translation
GO:0006413 IC translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0031369 IEA translation initiation factor binding
GO:0033290 IEA eukaryotic 48S preinitiation complex
GO:0071541 IEA eukaryotic translation initiation factor 3 complex, eIF3m

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028592 Eif3m-001 protein_coding Mus_musculus 0 1615
ENSMUST00000119064 Gm7658-001 processed_pseudogene Mus_musculus 0 1489
ENSMUST00000111110 Eif3m-004 protein_coding Mus_musculus 0 968
ENSMUST00000131266 Eif3m-002 retained_intron Mus_musculus 0 747
ENSMUST00000148476 Eif3m-003 protein_coding Mus_musculus 0 363

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