C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004RH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007990-ENSDARG00000013931 CGP 7955 18:44008076-44072067
GeneTranscriptPositionBiotype
ENSDARG00000007990 (wt1b)
wilms tumor 1b 		ENSDART00000146543 (wt1b-001) 44008076-44031137 protein_coding
ENSDARG00000013931 (eif3m)
eukaryotic translation initiation factor 3, subunit M 		ENSDART00000010256 (eif3m-001) 44059348-44072067 protein_coding
ENSDARG00000085205 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000120605 (5S_rRNA.1066-201) 44068346-44068462 rRNA
ENSDARG00000094920 (si:ch211-4l14.2)
si:ch211-4l14.2 		ENSDART00000142571 (si:ch211-4l14.2-001) 44033549-44059293 processed_transcript
CIL_0004RH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184937-ENSG00000149100 CGP 9606 11:32387775-32606262
GeneTranscriptPositionBiotype
ENSG00000149100 (EIF3M)
eukaryotic translation initiation factor 3, subunit M 		ENST00000323213 (EIF3M-007) 32583839-32596010 protein_coding
ENST00000524711 (EIF3M-005) 32583848-32600793 nonsense_mediated_decay
ENST00000524896 (EIF3M-002) 32583834-32602823 protein_coding
ENST00000525054 (EIF3M-012) 32593769-32602302 retained_intron
ENST00000525782 (EIF3M-004) 32583832-32601501 nonsense_mediated_decay
ENST00000526267 (EIF3M-013) 32589586-32602377 protein_coding
ENST00000530026 (EIF3M-010) 32583884-32594097 retained_intron
ENST00000531120 (EIF3M-001) 32583825-32606262 protein_coding
ENST00000531186 (EIF3M-008) 32583832-32588927 retained_intron
ENST00000531921 (EIF3M-003) 32583798-32596015 nonsense_mediated_decay
ENST00000532054 (EIF3M-006) 32583976-32588681 processed_transcript
ENST00000532444 (EIF3M-009) 32583838-32593949 nonsense_mediated_decay
ENST00000533439 (EIF3M-011) 32584069-32589603 protein_coding
ENSG00000183242 (WT1-AS)
WT1 antisense RNA 		ENST00000395900 (WT1-AS-001) 32435579-32441404 antisense
ENST00000442957 (WT1-AS-005) 32438370-32439132 antisense
ENST00000459866 (WT1-AS-003) 32435776-32437051 antisense
ENST00000478367 (WT1-AS-004) 32437623-32438326 antisense
ENST00000494911 (WT1-AS-002) 32435518-32438707 antisense
ENST00000525436 (WT1-AS-006) 32435801-32458769 antisense
ENST00000612620 (WT1-AS-201) 32437070-32437197 misc_RNA
ENST00000615677 (WT1-AS-202) 32437623-32437701 misc_RNA
ENSG00000184937 (WT1)
Wilms tumor 1 		ENST00000332351 (WT1-001) 32387775-32435630 protein_coding
ENST00000379077 (WT1-005) 32387775-32435387 nonsense_mediated_decay
ENST00000379079 (WT1-002) 32387775-32430813 protein_coding
ENST00000448076 (WT1-009) 32388679-32435535 protein_coding
ENST00000452863 (WT1-004) 32387784-32435345 protein_coding
ENST00000526685 (WT1-007) 32396257-32400615 protein_coding
ENST00000527775 (WT1-006) 32396366-32429029 protein_coding
ENST00000527882 (WT1-008) 32389042-32417597 protein_coding
ENST00000530998 (WT1-003) 32387778-32430813 protein_coding
ENSG00000186714 (CCDC73)
coiled-coil domain containing 73 		ENST00000335185 (CCDC73-001) 32602246-32794641 protein_coding
ENST00000528333 (CCDC73-004) 32602725-32635832 protein_coding
ENST00000531481 (CCDC73-003) 32679861-32794610 protein_coding
ENST00000534415 (CCDC73-002) 32615870-32794658 processed_transcript
ENSG00000270903 (HNRNPA3P9)
heterogeneous nuclear ribonucleoprotein A3 pseudogene 9 		ENST00000604913 (HNRNPA3P9-001) 32591793-32592771 processed_pseudogene
ENSG00000273677 (WT1-AS_2)
WT1 antisense RNA conserved region 2 		ENST00000613208 (WT1-AS_2.1-201) 32436311-32436447 misc_RNA
ENSG00000273908 (WT1-AS_7)
WT1 antisense RNA conserved region 7 		ENST00000426618 (WT1-AS_7.1-201) 32439716-32440009 misc_RNA
ENSG00000277119 (WT1-AS_8)
WT1 antisense RNA conserved region 8 		ENST00000615200 (WT1-AS_8.1-201) 32440109-32440383 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RH_0001ENSDARG00000007990ENSDART00000146543ENSDARG00000013931ENSDART00000010256ENSDARG00000085205ENSDART00000120605ENSDARG00000094920ENSDART00000142571CIL_0004RH_0002ENSG00000149100ENST00000323213ENST00000524711ENST00000524896ENST00000525054ENST00000525782ENST00000526267ENST00000530026ENST00000531120ENST00000531186ENST00000531921ENST00000532054ENST00000532444ENST00000533439ENSG00000183242ENST00000395900ENST00000442957ENST00000459866ENST00000478367ENST00000494911ENST00000525436ENST00000612620ENST00000615677ENSG00000184937ENST00000332351ENST00000379077ENST00000379079ENST00000448076ENST00000452863ENST00000526685ENST00000527775ENST00000527882ENST00000530998ENSG00000186714ENST00000335185ENST00000528333ENST00000531481ENST00000534415ENSG00000270903ENST00000604913ENSG00000273677ENST00000613208ENSG00000273908ENST00000426618ENSG00000277119ENST00000615200
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RH_0001ENSDARG00000007990ENSDART00000146543ENSDARG00000013931ENSDART00000010256ENSDARG00000085205ENSDART00000120605ENSDARG00000094920ENSDART00000142571CIL_0004RH_0002ENSG00000149100ENST00000323213ENST00000524896ENST00000525054ENST00000526267ENST00000530026ENST00000531120ENST00000531186ENST00000532054ENST00000532444ENSG00000183242ENST00000395900ENST00000525436ENSG00000184937ENST00000332351ENST00000379079ENST00000448076ENST00000452863ENST00000527775ENST00000530998ENSG00000186714ENST00000335185ENSG00000270903ENST00000604913ENSG00000273677ENST00000613208ENSG00000273908ENST00000426618ENSG00000277119ENST00000615200
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007990 ENSDART00000146543 N/A N/A N/A 0.297±0.03 N/A N/A 3.691±0.00 N/A 0.145±0.00 N/A 0.512±0.00 N/A N/A N/A
ENSDARG00000013931 ENSDART00000010256 N/A N/A N/A 38.819±30.47 N/A N/A 168.553±119.65 275.218±0.00 101.192±0.00 N/A 63.682±0.00 N/A N/A N/A
ENSDARG00000085205 ENSDART00000120605 N/A N/A N/A 163.121±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000094920 ENSDART00000142571 N/A N/A N/A 0.464±0.09 N/A N/A 0.312±0.12 0.226±0.00 N/A N/A 0.164±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000149100 ENST00000323213 N/A N/A N/A 4.277±0.00 6.200±0.00 3.962±0.00 3.254±0.00 3.777±0.00 11.773±0.00 N/A 4.447±0.00 37.115±28.04 N/A N/A
ENST00000524711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524896 N/A N/A 2.301±0.00 N/A N/A 2.219±0.00 1.412±0.00 1.623±0.00 N/A N/A 2.489±0.00 18.822±13.65 12.741±0.19 N/A
ENST00000525054 56.984±0.00 46.378±0.00 N/A 12.007±0.98 27.702±0.00 36.454±24.71 19.891±12.10 21.005±12.97 30.119±0.00 36.992±0.00 26.731±21.68 87.310±69.60 94.939±0.00 80.545±23.41
ENST00000525782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526267 N/A N/A N/A 14.300±0.00 17.963±9.17 N/A N/A 14.476±0.00 N/A N/A N/A 51.706±5.26 N/A 34.687±0.00
ENST00000530026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.857±0.00 22.658±0.00 N/A
ENST00000531120 N/A 2.479±0.00 0.740±0.00 2.986±0.01 1.249±0.00 0.765±0.00 1.119±0.41 1.154±0.37 2.302±0.00 2.400±0.00 0.381±0.00 3.289±1.81 N/A N/A
ENST00000531186 N/A N/A N/A N/A N/A 7.375±0.00 N/A N/A N/A N/A N/A 12.641±0.00 N/A N/A
ENST00000531921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 81.474±0.00 46.672±0.00 56.376±0.00
ENST00000532444 61.548±0.00 52.803±0.00 4.660±0.00 24.165±0.00 40.532±0.00 70.358±0.00 31.060±0.00 24.456±18.97 24.491±0.00 43.873±0.00 51.380±0.00 71.401±6.83 27.163±8.80 49.436±18.38
ENST00000533439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183242 ENST00000395900 0.030±0.00 0.046±0.00 N/A 0.032±0.00 0.011±0.00 N/A N/A 1.378±0.00 0.034±0.00 N/A N/A 4.231±0.00 N/A N/A
ENST00000442957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525436 N/A 0.214±0.00 N/A 0.052±0.00 0.036±0.00 N/A N/A N/A 0.051±0.00 N/A 0.019±0.00 N/A N/A N/A
ENST00000612620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184937 ENST00000332351 N/A N/A 0.327±0.00 N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A 13.872±12.80 1.057±0.00 N/A
ENST00000379077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.878±1.11
ENST00000448076 N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 1.987±0.40 6.874±0.00
ENST00000452863 N/A N/A N/A 0.022±0.00 N/A N/A 0.654±0.36 6.239±0.00 0.150±0.00 0.135±0.00 0.015±0.00 17.746±8.95 1.669±0.26 5.292±0.00
ENST00000526685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527775 N/A N/A N/A N/A N/A 1.370±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530998 0.031±0.00 N/A N/A N/A 0.146±0.00 N/A N/A N/A N/A N/A N/A 3.366±0.00 N/A N/A
ENSG00000186714 ENST00000335185 N/A N/A N/A N/A N/A N/A N/A 0.488±0.00 N/A N/A N/A N/A N/A 4.638±0.00
ENST00000528333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270903 ENST00000604913 0.138±0.00 0.235±0.00 0.362±0.00 0.117±0.01 0.099±0.00 0.361±0.00 0.318±0.16 0.151±0.00 0.068±0.05 0.046±0.00 0.140±0.00 0.101±0.07 0.038±0.00 0.061±0.01
ENSG00000273677 ENST00000613208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.062±0.00 N/A 0.409±0.00
ENSG00000273908 ENST00000426618 N/A N/A N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A N/A N/A N/A N/A
ENSG00000277119 ENST00000615200 N/A N/A N/A N/A N/A N/A N/A N/A 3.881±0.00 N/A N/A N/A N/A N/A

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