C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear RNA export factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531131 NXF1-004 ENSG00000162231 9606 - 11:62800113-62805440 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartOvaryPlacentaTestisENST00000531131
Transcript ID Breast Heart Ovary Placenta Testis
ENST00000531131 2.831±0.00 1.199±0.00 11.529±7.33 15.718±0.00 19.844±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006406 IEA mRNA export from nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183939 Nxf1-003 protein_coding Mus_musculus 0 1022
ENSMUST00000184970 Nxf1-002 protein_coding Mus_musculus 0 959
ENSMUST00000010241 Nxf1-001 protein_coding Mus_musculus 0 747

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