C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB2A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531289 RAB2A-007 ENSG00000104388 9606 + 8:60516936-60620988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000531289
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000531289 40.438±0.00 16.634±0.00 3.753±0.00 32.471±0.00 29.142±0.00 13.979±8.82 4.036±0.00 4.701±0.00 23.893±0.00 40.845±0.00 14.239±7.63 20.531±4.95 24.165±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003G7 CIL_0003G7_0001 CGP 8:60187347-60623627
CIL_000379 CIL_000379_0001 CGP 8:60516857-60868028

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0000278 TAS mitotic cell cycle
GO:0003924 IDA:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA:IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005765 IDA lysosomal membrane
GO:0005783 IEA endoplasmic reticulum
GO:0006184 IDA:IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007030 IMP Golgi organization
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019003 IDA GDP binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060232 Rab2a-001 protein_coding Mus_musculus 0 987

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