C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sphingomyelin phosphodiesterase 1, acid lysosomal
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531303 SMPD1-003 ENSG00000166311 9606 + 11:6390582-6394778 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverOvaryTestisENST00000531303
Transcript ID Breast Colon Heart Liver Ovary Testis
ENST00000531303 0.574±0.00 0.676±0.00 1.146±0.00 0.748±0.00 2.316±0.00 1.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079D CIL_00079D_0001 CGP 11:6318946-6394998
CIL_0004AE CIL_0004AE_0001 CGP 11:6390431-6419414

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046983 Smpd1-201 protein_coding Mus_musculus 0 806

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