C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004AE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166311-ENSG00000166313 CGP 9606 11:6390431-6419414
GeneTranscriptPositionBiotype
ENSG00000166311 (SMPD1)
sphingomyelin phosphodiesterase 1, acid lysosomal 		ENST00000342245 (SMPD1-001) 6390431-6394995 protein_coding
ENST00000526280 (SMPD1-004) 6391877-6394998 protein_coding
ENST00000527275 (SMPD1-008) 6390475-6394778 protein_coding
ENST00000530395 (SMPD1-009) 6390446-6392042 protein_coding
ENST00000531303 (SMPD1-003) 6390582-6394778 nonsense_mediated_decay
ENST00000531336 (SMPD1-006) 6393293-6394373 retained_intron
ENST00000532367 (SMPD1-005) 6393518-6394128 retained_intron
ENST00000533123 (SMPD1-002) 6390503-6394998 nonsense_mediated_decay
ENST00000533196 (SMPD1-010) 6390440-6392056 processed_transcript
ENST00000534405 (SMPD1-007) 6390473-6394991 nonsense_mediated_decay
ENSG00000166313 (APBB1)
amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) 		ENST00000299402 (APBB1-002) 6395125-6419070 protein_coding
ENST00000311051 (APBB1-001) 6395125-6419414 protein_coding
ENST00000389906 (APBB1-201) 6395124-6419111 protein_coding
ENST00000524626 (APBB1-010) 6395158-6402784 retained_intron
ENST00000526240 (APBB1-020) 6395125-6396574 processed_transcript
ENST00000526925 (APBB1-017) 6401177-6404863 retained_intron
ENST00000529519 (APBB1-006) 6395163-6405441 protein_coding
ENST00000529778 (APBB1-009) 6401074-6402209 retained_intron
ENST00000529890 (APBB1-004) 6401365-6404796 protein_coding
ENST00000530885 (APBB1-007) 6395468-6404898 protein_coding
ENST00000532020 (APBB1-026) 6403319-6419089 protein_coding
ENST00000533139 (APBB1-003) 6401347-6404796 retained_intron
ENST00000533407 (APBB1-016) 6401052-6419071 retained_intron
ENST00000534188 (APBB1-008) 6401587-6404785 retained_intron
ENST00000608394 (APBB1-005) 6395143-6405417 protein_coding
ENST00000608435 (APBB1-011) 6395125-6419071 non_stop_decay
ENST00000608645 (APBB1-025) 6395304-6405415 protein_coding
ENST00000608655 (APBB1-024) 6395125-6404843 protein_coding
ENST00000608704 (APBB1-014) 6395125-6405660 protein_coding
ENST00000609331 (APBB1-018) 6395430-6404664 protein_coding
ENST00000609360 (APBB1-023) 6395125-6419070 protein_coding
ENST00000610474 (APBB1-202) 6395124-6405417 protein_coding
ENST00000618005 (APBB1-203) 6395124-6405417 protein_coding
ENST00000621678 (APBB1-204) 6395124-6404691 protein_coding
CIL_0004AE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037049-ENSMUSG00000037032 CGP 10090 7:105554360-105581653
GeneTranscriptPositionBiotype
ENSMUSG00000037032 (Apbb1)
amyloid beta (A4) precursor protein-binding, family B, member 1 		ENSMUST00000081165 (Apbb1-201) 105558486-105574402 protein_coding
ENSMUST00000186814 (Apbb1-014) 105559468-105567294 retained_intron
ENSMUST00000186868 (Apbb1-009) 105567094-105569592 protein_coding
ENSMUST00000187051 (Apbb1-010) 105566665-105569273 protein_coding
ENSMUST00000187057 (Apbb1-007) 105558818-105568777 protein_coding
ENSMUST00000187683 (Apbb1-011) 105566550-105569265 protein_coding
ENSMUST00000187721 (Apbb1-012) 105566107-105568963 protein_coding
ENSMUST00000188001 (Apbb1-006) 105558487-105568956 retained_intron
ENSMUST00000188368 (Apbb1-008) 105558484-105568777 protein_coding
ENSMUST00000188440 (Apbb1-017) 105565590-105581192 protein_coding
ENSMUST00000188726 (Apbb1-016) 105573968-105581188 protein_coding
ENSMUST00000189072 (Apbb1-004) 105558484-105569513 protein_coding
ENSMUST00000189265 (Apbb1-018) 105558523-105569292 protein_coding
ENSMUST00000189378 (Apbb1-002) 105558503-105581491 protein_coding
ENSMUST00000190369 (Apbb1-005) 105558484-105569297 protein_coding
ENSMUST00000190961 (Apbb1-013) 105567168-105568670 retained_intron
ENSMUST00000191011 (Apbb1-001) 105558483-105581653 protein_coding
ENSMUST00000191250 (Apbb1-015) 105559161-105565505 retained_intron
ENSMUST00000191601 (Apbb1-003) 105558484-105581278 protein_coding
ENSMUSG00000037049 (Smpd1)
sphingomyelin phosphodiesterase 1, acid lysosomal 		ENSMUST00000046983 (Smpd1-201) 105554360-105558388 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AE_0001ENSG00000166311ENST00000342245ENST00000526280ENST00000527275ENST00000531303ENST00000531336ENST00000533123ENST00000534405ENSG00000166313ENST00000299402ENST00000311051ENST00000389906ENST00000524626ENST00000526925ENST00000529890ENST00000530885ENST00000532020ENST00000534188ENST00000608435ENST00000608655ENST00000609331ENST00000609360CIL_0004AE_0002ENSMUSG00000037032ENSMUST00000081165ENSMUST00000187057ENSMUST00000188440ENSMUST00000189072ENSMUST00000189265ENSMUST00000189378ENSMUST00000191011ENSMUST00000191250ENSMUST00000191601ENSMUSG00000037049ENSMUST00000046983
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166311 ENST00000342245 7.480±0.00 8.963±0.00 1.860±0.00 8.753±4.54 3.148±2.06 0.861±0.00 7.042±5.56 17.162±8.90 18.292±16.27 7.327±0.00 5.524±3.44 9.294±7.22 28.036±12.13 0.798±0.00
ENST00000526280 N/A 5.455±0.00 N/A 6.786±0.00 N/A N/A N/A 32.298±0.00 N/A N/A N/A N/A N/A N/A
ENST00000527275 N/A N/A 1.379±0.00 N/A N/A 1.549±0.00 N/A N/A N/A 1.418±0.00 N/A 1.237±0.46 N/A N/A
ENST00000530395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531303 N/A N/A N/A N/A 0.574±0.00 0.676±0.00 1.146±0.00 N/A 0.748±0.00 N/A N/A 2.316±0.00 N/A 1.030±0.00
ENST00000531336 N/A N/A N/A 8.263±0.00 N/A N/A N/A N/A N/A N/A N/A 5.601±0.00 12.445±0.00 1.249±0.00
ENST00000532367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533123 3.326±0.00 N/A N/A N/A 4.920±0.00 4.357±0.00 N/A N/A N/A N/A N/A N/A N/A 3.147±0.00
ENST00000533196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.453±0.00 N/A N/A N/A
ENSG00000166313 ENST00000299402 17.247±0.00 14.263±0.00 N/A N/A 10.188±0.00 19.675±0.00 10.303±9.37 13.993±0.00 N/A 12.705±11.96 5.099±3.08 16.707±17.39 6.712±3.25 14.525±7.81
ENST00000311051 N/A N/A N/A N/A N/A N/A 5.209±0.00 3.465±0.00 1.678±0.34 N/A 7.847±0.00 6.872±0.00 1.967±0.01 N/A
ENST00000389906 N/A N/A 0.814±0.00 5.191±0.00 0.772±0.00 0.356±0.00 0.314±0.00 N/A N/A 0.195±0.00 N/A N/A N/A N/A
ENST00000524626 N/A 7.894±0.00 N/A N/A 2.752±0.00 N/A N/A N/A N/A N/A 5.258±0.00 N/A N/A 8.150±2.08
ENST00000526240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526925 N/A N/A N/A N/A 0.539±0.00 N/A N/A N/A N/A N/A N/A 1.396±0.00 N/A N/A
ENST00000529519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529890 N/A N/A 0.714±0.00 N/A 1.249±0.00 N/A N/A N/A 1.489±0.00 N/A N/A N/A N/A N/A
ENST00000530885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.165±0.00 N/A
ENST00000532020 N/A N/A N/A N/A N/A N/A N/A 1.060±0.00 N/A N/A N/A 5.488±0.00 9.907±0.00 24.566±0.00
ENST00000533139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534188 N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A 0.488±0.00 0.590±0.00 N/A N/A N/A
ENST00000608394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608435 N/A N/A N/A 34.047±28.57 N/A N/A N/A N/A N/A 0.633±0.00 N/A N/A N/A N/A
ENST00000608645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608655 N/A N/A N/A 10.849±0.00 N/A N/A N/A 5.016±0.00 0.463±0.00 N/A N/A N/A N/A N/A
ENST00000608704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609331 N/A N/A N/A N/A N/A N/A N/A 0.474±0.00 N/A N/A N/A N/A N/A N/A
ENST00000609360 N/A N/A N/A 25.962±19.68 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037032 ENSMUST00000081165 N/A N/A N/A 38.471±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187057 N/A 3.521±0.35 N/A N/A 1.493±0.00 2.425±0.17 N/A 1.553±0.00 N/A N/A N/A N/A N/A 4.585±0.49
ENSMUST00000187683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188440 N/A N/A N/A 93.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.198±0.00
ENSMUST00000188726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.488±0.00
ENSMUST00000189265 N/A N/A N/A N/A 3.078±0.00 N/A 33.748±2.18 N/A 0.264±0.14 16.644±1.47 N/A 4.319±0.21 N/A 3.838±1.67
ENSMUST00000189378 1.904±0.57 N/A 7.889±0.09 N/A N/A N/A N/A 1.840±0.62 0.514±0.26 N/A 1.185±0.45 2.177±0.89 4.816±2.85 N/A
ENSMUST00000190369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191011 2.102±0.88 N/A 6.588±0.04 10.391±1.04 1.029±0.03 1.456±0.36 11.062±1.56 1.616±0.45 0.305±0.14 10.585±1.73 1.613±0.57 2.667±1.62 5.466±2.38 1.154±0.26
ENSMUST00000191250 N/A N/A N/A N/A N/A N/A 50.150±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191601 2.197±1.15 6.668±0.90 N/A 65.917±7.07 3.490±0.77 5.587±1.53 5.442±0.00 3.736±0.87 0.288±0.32 21.428±3.33 0.876±0.02 7.325±2.04 2.780±0.76 1.178±0.00
ENSMUSG00000037049 ENSMUST00000046983 36.850±10.49 39.305±2.23 15.185±0.48 18.116±1.87 30.885±5.51 21.326±0.74 61.966±6.67 51.758±7.36 16.891±7.56 41.019±2.43 25.189±0.77 20.987±5.13 27.581±9.59 1.539±0.60

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