C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase, Mg2+/Mn2+ dependent, 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000532036 PPM1A-004 ENSG00000100614 9606 + 14:60245785-60293355 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000532036
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000532036 6.611±0.00 6.814±0.00 6.631±0.00 12.077±0.00 10.293±0.00 11.670±0.00 6.527±0.00 8.832±0.00 4.895±0.00 3.603±0.09 18.561±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036H CIL_00036H_0002 CGP 14:60144120-60299087
CIL_0000S6 CIL_0000S6_0001 CGP 14:60245752-60515543

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021514 Ppm1a-201 protein_coding Mus_musculus 0 987
ENSMUST00000172692 Gm7211-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000173237 Gm6004-001 processed_pseudogene Mus_musculus 1e-33 148

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