C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00036H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000003444-ENSDARG00000032155 CGP 7955 13:31760311-31803792
GeneTranscriptPositionBiotype
ENSDARG00000003444 (dhrs7)
dehydrogenase/reductase (SDR family) member 7 		ENSDART00000005670 (dhrs7-001) 31760311-31767967 protein_coding
CIL_00036H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100612-ENSG00000100614 CGP 9606 14:60144120-60299087
GeneTranscriptPositionBiotype
ENSG00000100614 (PPM1A)
protein phosphatase, Mg2+/Mn2+ dependent, 1A 		ENST00000325642 (PPM1A-009) 60245752-60292731 protein_coding
ENST00000325658 (PPM1A-002) 60249441-60288555 protein_coding
ENST00000395076 (PPM1A-001) 60249268-60299087 protein_coding
ENST00000525399 (PPM1A-006) 60250431-60283266 protein_coding
ENST00000528241 (PPM1A-008) 60249660-60283089 protein_coding
ENST00000531143 (PPM1A-005) 60245757-60292482 nonsense_mediated_decay
ENST00000531937 (PPM1A-007) 60256762-60283147 protein_coding
ENST00000532036 (PPM1A-004) 60245785-60293355 nonsense_mediated_decay
ENSG00000126773 (PCNXL4)
pecanex-like 4 (Drosophila) 		ENST00000317623 (PCNXL4-003) 60091911-60148221 protein_coding
ENST00000391611 (PCNXL4-004) 60091919-60111157 protein_coding
ENST00000406854 (PCNXL4-005) 60091919-60134814 protein_coding
ENST00000406949 (PCNXL4-001) 60091927-60169133 protein_coding
ENST00000483571 (PCNXL4-002) 60115344-60126190 retained_intron
ENST00000553513 (PCNXL4-008) 60115621-60118549 retained_intron
ENST00000553898 (PCNXL4-013) 60147325-60169131 processed_transcript
ENST00000554534 (PCNXL4-012) 60115982-60124273 protein_coding
ENST00000555569 (PCNXL4-007) 60092186-60114980 retained_intron
ENST00000555740 (PCNXL4-006) 60118443-60134809 nonsense_mediated_decay
ENST00000555929 (PCNXL4-010) 60118624-60134227 nonsense_mediated_decay
ENST00000556360 (PCNXL4-011) 60124306-60134085 nonsense_mediated_decay
ENST00000556907 (PCNXL4-009) 60091977-60115770 processed_transcript
ENSG00000242135 (RPL17P2)
ribosomal protein L17 pseudogene 2 		ENST00000491913 (RPL17P2-001) 60212462-60212912 processed_pseudogene
ENSG00000254718 (CTD-2184C24.2)
 ENST00000529171 (CTD-2184C24.2-002) 60240127-60248765 antisense
ENST00000532515 (CTD-2184C24.2-001) 60240121-60245653 antisense
ENST00000553269 (CTD-2184C24.2-003) 60240132-60245336 antisense
ENST00000553775 (CTD-2184C24.2-004) 60240142-60245568 antisense
ENSG00000258563 (PSMA3P)
proteasome (prosome, macropain) subunit, alpha type, 3 pseudogene 		ENST00000555485 (PSMA3P-001) 60179382-60180016 processed_pseudogene
ENSG00000258896 (SCOCP1)
short coiled-coil protein pseudogene 1 		ENST00000554676 (SCOCP1-001) 60158976-60159324 processed_pseudogene
CIL_00036H_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021094-ENSMUSG00000021096 CGP 10090 12:72650356-72794940
GeneTranscriptPositionBiotype
ENSMUSG00000021094 (Dhrs7)
dehydrogenase/reductase (SDR family) member 7 		ENSMUST00000021512 (Dhrs7-201) 72650356-72664828 protein_coding
ENSMUSG00000021096 (Ppm1a)
protein phosphatase 1A, magnesium dependent, alpha isoform 		ENSMUST00000021514 (Ppm1a-201) 72761211-72794940 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00036H_0001ENSDARG00000003444ENSDART00000005670CIL_00036H_0002ENSG00000100614ENST00000325642ENST00000325658ENST00000395076ENST00000525399ENST00000528241ENST00000531143ENST00000531937ENST00000532036ENSG00000126773ENST00000317623ENST00000391611ENST00000406854ENST00000406949ENST00000483571ENST00000553513ENST00000553898ENST00000554534ENST00000555569ENST00000555740ENST00000555929ENST00000556360ENST00000556907ENSG00000242135ENST00000491913ENSG00000254718ENST00000529171ENST00000532515ENST00000553269ENST00000553775ENSG00000258563ENST00000555485ENSG00000258896ENST00000554676CIL_00036H_0003ENSMUSG00000021094ENSMUST00000021512ENSMUSG00000021096ENSMUST00000021514
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00036H_0001ENSDARG00000003444ENSDART00000005670CIL_00036H_0002ENSG00000100614ENST00000325642ENST00000325658ENST00000395076ENST00000525399ENST00000531143ENST00000531937ENST00000532036ENSG00000126773ENST00000317623ENST00000391611ENST00000406854ENST00000406949ENST00000555740ENSG00000242135ENST00000491913ENSG00000254718ENST00000529171ENST00000532515ENST00000553775ENSG00000258563ENST00000555485ENSG00000258896ENST00000554676CIL_00036H_0003ENSMUSG00000021094ENSMUST00000021512ENSMUSG00000021096ENSMUST00000021514
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003444 ENSDART00000005670 N/A N/A N/A 22.019±0.00 N/A N/A 6.344±4.54 0.405±0.00 1.940±0.00 N/A 6.414±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100614 ENST00000325642 8.040±0.00 5.227±0.00 N/A N/A 6.107±0.00 N/A 11.310±0.00 8.765±0.00 4.397±0.00 6.159±0.00 4.030±0.00 4.289±0.00 2.260±0.00 13.947±7.74
ENST00000325658 2.406±0.00 1.532±0.00 1.680±0.00 4.834±0.33 2.204±0.39 2.574±0.00 1.878±0.28 1.832±0.00 3.844±0.00 2.942±1.31 N/A 2.040±0.73 0.988±0.00 N/A
ENST00000395076 4.070±0.00 1.797±0.00 3.517±0.00 10.444±0.82 3.970±0.45 6.652±0.13 5.494±0.33 4.848±1.63 4.468±2.83 4.581±2.01 9.680±5.37 2.790±0.27 1.774±0.95 4.356±0.31
ENST00000525399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.514±0.00 6.189±0.00 26.565±0.00
ENST00000528241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.462±0.00
ENST00000531937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.779±0.00
ENST00000532036 6.611±0.00 6.814±0.00 N/A N/A 6.631±0.00 12.077±0.00 10.293±0.00 11.670±0.00 6.527±0.00 8.832±0.00 N/A 4.895±0.00 3.603±0.09 18.561±0.00
ENSG00000126773 ENST00000317623 N/A 1.124±0.00 N/A 0.838±0.06 N/A N/A 0.430±0.06 1.006±0.00 N/A N/A 2.833±0.00 1.103±0.00 0.767±0.00 0.790±0.27
ENST00000391611 N/A N/A N/A N/A 1.758±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406854 3.473±0.00 N/A N/A 3.992±0.00 2.734±0.48 3.709±0.00 2.877±0.64 4.248±0.00 4.351±0.00 2.927±0.00 N/A 5.837±1.07 2.853±0.20 5.983±1.02
ENST00000406949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.569±0.00 N/A N/A 4.905±0.00
ENST00000483571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.406±0.00 N/A 3.946±0.00
ENST00000555929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242135 ENST00000491913 0.029±0.00 0.058±0.00 N/A N/A N/A 0.053±0.00 0.843±0.00 N/A N/A N/A N/A N/A N/A 0.213±0.00
ENSG00000254718 ENST00000529171 N/A 0.270±0.00 N/A 0.169±0.00 0.343±0.00 0.061±0.00 N/A 0.256±0.00 0.028±0.00 N/A 0.133±0.00 N/A 0.113±0.00 4.353±0.00
ENST00000532515 0.017±0.00 N/A N/A N/A 0.058±0.00 N/A 0.008±0.00 N/A N/A N/A N/A 0.028±0.00 0.015±0.00 0.626±0.31
ENST00000553269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553775 0.182±0.00 N/A N/A 0.177±0.00 N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A 11.747±2.64
ENSG00000258563 ENST00000555485 N/A N/A N/A 0.062±0.00 N/A N/A 0.031±0.02 N/A N/A N/A N/A N/A N/A N/A
ENSG00000258896 ENST00000554676 N/A 0.364±0.00 0.907±0.00 N/A 1.801±0.00 N/A 0.123±0.00 0.142±0.00 1.823±0.00 0.600±0.54 3.018±0.00 0.464±0.36 N/A 0.343±0.25
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021094 ENSMUST00000021512 86.291±10.52 70.384±12.15 40.417±1.72 6.725±6.39 71.150±11.03 20.420±2.39 24.193±2.80 21.423±3.02 23.435±13.57 44.276±1.84 5.676±0.56 42.134±6.95 11.246±6.05 8.805±1.74
ENSMUSG00000021096 ENSMUST00000021514 23.524±3.51 28.437±9.32 34.041±1.06 22.961±3.87 20.577±5.74 21.229±0.66 15.761±7.02 16.750±3.83 19.247±2.00 16.477±1.59 30.146±13.07 15.843±5.82 19.698±4.83 56.192±11.05

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