C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit M
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000532444 EIF3M-009 ENSG00000149100 9606 + 11:32583838-32593949 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000532444
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000532444 61.548±0.00 52.803±0.00 4.660±0.00 24.165±0.00 40.532±0.00 70.358±0.00 31.060±0.00 24.456±18.97 24.491±0.00 43.873±0.00 51.380±0.00 71.401±6.83 27.163±8.80 49.436±18.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004RH CIL_0004RH_0002 CGP 11:32387775-32606262
CIL_0008SB CIL_0008SB_0001 VISTA 11:32486574-33087503

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028592 Eif3m-001 protein_coding Mus_musculus 0 749
ENSMUST00000119064 Gm7658-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000111110 Eif3m-004 protein_coding Mus_musculus 0 237
ENSMUST00000131266 Eif3m-002 retained_intron Mus_musculus 2e-32 143
ENSMUST00000148476 Eif3m-003 protein_coding Mus_musculus 1e-25 121

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