C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PBX/knotted 1 homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000532623 PKNOX2-003 ENSG00000165495 9606 + 11:125164754-125431544 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryPlacentaENST00000532623
Transcript ID Colon Ovary Placenta
ENST00000532623 0.211±0.00 1.066±0.00 0.826±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080D CIL_00080D_0001 VISTA 11:124962373-125564535

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175938 Pknox2-005 nonsense_mediated_decay Mus_musculus 0 2170
ENSMUST00000080754 Pknox2-201 protein_coding Mus_musculus 0 1999
ENSMUST00000177080 Pknox2-006 processed_transcript Mus_musculus 0 1999
ENSMUST00000039674 Pknox2-001 protein_coding Mus_musculus 0 1999
ENSMUST00000177218 Pknox2-002 protein_coding Mus_musculus 0 1999
ENSMUST00000176562 Pknox2-004 retained_intron Mus_musculus 0 604
ENSMUST00000176622 Pknox2-003 retained_intron Mus_musculus 0 309
ENSMUST00000177444 Pknox2-007 protein_coding Mus_musculus 0 261
ENSMUST00000189294 Pknox2-011 protein_coding Mus_musculus 0 255
ENSMUST00000188348 Pknox2-010 protein_coding Mus_musculus 0 255
ENSMUST00000188057 Pknox2-008 protein_coding Mus_musculus 1.99965e-42 178

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