C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000532642 ATP6V0B-012 ENSG00000117410 9606 + 1:43974944-43978213 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverLungOvaryTestisENST00000532642
Transcript ID Bladder Brain Heart Liver Lung Ovary Testis
ENST00000532642 0.296±0.00 2.255±0.00 0.305±0.00 0.169±0.00 0.507±0.00 3.927±2.75 3.322±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B8 CIL_0009B8_0001 VISTA 1:43734711-44337665
CIL_0008SF CIL_0008SF_0001 VISTA 1:43949748-44550457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005768 IEA endosome
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0033177 IEA proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036380 Atp6v0b-001 protein_coding Mus_musculus 0 802
ENSMUST00000150204 Atp6v0b-007 protein_coding Mus_musculus 0 630
ENSMUST00000133530 Atp6v0b-002 retained_intron Mus_musculus 0 446
ENSMUST00000132073 Atp6v0b-006 protein_coding Mus_musculus 0 405
ENSMUST00000152356 Atp6v0b-003 retained_intron Mus_musculus 0 348
ENSMUST00000124974 Atp6v0b-004 retained_intron Mus_musculus 0 259
ENSMUST00000136596 Atp6v0b-008 protein_coding Mus_musculus 4e-39 167
ENSMUST00000147845 Atp6v0b-005 protein_coding Mus_musculus 1e-23 115

Loading