C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000532859 RP11-472I20.2-001 ENSG00000254512 9606 + 11:43733759-43734564 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungOvaryTestisENST00000532859
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Ovary Testis
ENST00000532859 0.043±0.00 2.017±0.00 0.220±0.17 1.511±0.00 0.834±0.00 0.222±0.18 0.179±0.14 2.150±0.00 0.079±0.06 0.066±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UX CIL_0002UX_0002 CGP 11:43556436-43920266

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125172 Phb-001 protein_coding Mus_musculus 0 876
ENSMUST00000146631 Gm7666-001 transcribed_processed_pseudogene Mus_musculus 0 870
ENSMUST00000117522 1700071K01Rik-001 processed_pseudogene Mus_musculus 0 832
ENSMUST00000117258 Gm7781-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000036374 Phb-002 protein_coding Mus_musculus 0 656
ENSMUST00000122108 Gm7841-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000120392 Gm4773-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000122042 Gm4996-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000123001 Phb-005 processed_transcript Mus_musculus 0 335
ENSMUST00000123071 Phb-004 processed_transcript Mus_musculus 0 291
ENSMUST00000127031 Phb-003 processed_transcript Mus_musculus 4e-21 106

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