C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700071K01 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117522 1700071K01Rik-001 ENSMUSG00000080980 10090 - 11:81572655-81573473 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyOvaryTestisENSMUST00000117522
Transcript ID Brain Breast Colon Heart Kidney Ovary Testis
ENSMUST00000117522 0.086±0.00 0.140±0.00 0.083±0.00 0.045±0.00 0.043±0.00 0.110±0.00 12.054±3.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074A CIL_00074A_0002 CGP 11:80858365-81968457
CIL_0008U5 CIL_0008U5_0002 VISTA 11:81312790-81913808

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300408 PHB-001 protein_coding Homo_sapiens 0 1026
ENST00000355202 ZNF607-001 protein_coding Homo_sapiens 0 662
ENST00000392260 PHBP1-001 processed_pseudogene Homo_sapiens 0 726
ENST00000393345 PHB-004 retained_intron Homo_sapiens 0 649
ENST00000395835 ZNF607-002 protein_coding Homo_sapiens 0 662
ENST00000412562 PHBP3-001 processed_pseudogene Homo_sapiens 0 904
ENST00000415677 PHBP7-001 processed_pseudogene Homo_sapiens 0 845
ENST00000416467 PHBP10-001 processed_pseudogene Homo_sapiens 0 793
ENST00000419140 PHB-002 protein_coding Homo_sapiens 0 948
ENST00000420550 PHBP11-001 processed_pseudogene Homo_sapiens 0 800
ENST00000434917 PHB-007 protein_coding Homo_sapiens 0 475
ENST00000437447 PHBP4-001 processed_pseudogene Homo_sapiens 0 588
ENST00000446318 RP11-715G18.3-001 processed_pseudogene Homo_sapiens 0 315
ENST00000446735 PHB-003 protein_coding Homo_sapiens 0 795
ENST00000453578 PHBP9-001 processed_pseudogene Homo_sapiens 0 726
ENST00000493810 PHBP8-001 processed_pseudogene Homo_sapiens 0 636
ENST00000504124 PHB-009 protein_coding Homo_sapiens 0 841
ENST00000506273 PHB-015 processed_transcript Homo_sapiens 0 497
ENST00000507748 PHB-014 retained_intron Homo_sapiens 0 270
ENST00000508009 PHB-013 processed_transcript Homo_sapiens 0 481
ENST00000511832 PHB-201 protein_coding Homo_sapiens 0 532
ENST00000511933 PHB-016 retained_intron Homo_sapiens 0 305
ENST00000512041 PHB-010 protein_coding Homo_sapiens 0 798
ENST00000532859 RP11-472I20.2-001 processed_pseudogene Homo_sapiens 0 832
ENST00000546648 RP11-474C8.4-001 processed_pseudogene Homo_sapiens 0 787
ENST00000547512 RP11-416A17.6-001 processed_pseudogene Homo_sapiens 0 603
ENST00000562636 RP11-467J12.1-001 processed_pseudogene Homo_sapiens 0 832
ENST00000603694 RP11-1007O24.4-001 processed_pseudogene Homo_sapiens 0 564
ENST00000614445 PHB-202 protein_coding Homo_sapiens 0 1026
ENST00000617874 PHB-203 protein_coding Homo_sapiens 0 1026

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