C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | parvin, alpha | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000533345  |
PARVA-003 |
ENSG00000197702 |
9606 | + |
11:12398241-12513804  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008T3 | CIL_0008T3_0001 | VISTA | 11:11882278-12483702 |
| CIL_0008YS | CIL_0008YS_0001 | VISTA | 11:11899653-12500760 |
| CIL_0007SQ | CIL_0007SQ_0001 | VISTA | 11:11959946-12561868 |
| CIL_0003PF | CIL_0003PF_0001 | CGP | 11:12276080-12530801 |
| CIL_0003PG | CIL_0003PG_0001 | CGP | 11:12377185-12944483 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000106640
|
Parva-004 | protein_coding | Mus_musculus | 0 | 774 |
|
ENSMUST00000033030
|
Parva-001 | protein_coding | Mus_musculus | 0 | 774 |
|
ENSMUST00000106643
|
Parva-002 | protein_coding | Mus_musculus | 0 | 774 |
|
ENSDART00000011351
|
parvab-001 | protein_coding | Danio_rerio | 0 | 514 |
|
ENSDART00000056847
|
parvab-201 | protein_coding | Danio_rerio | 0 | 514 |
|
ENSMUST00000126047
|
Parva-006 | processed_transcript | Mus_musculus | 3e-33 | 147 |
