C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy/beclin-1 regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533727 AMBRA1-002 ENSG00000110497 9606 - 11:46396414-46593948 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000533727
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000533727 1.989±0.00 2.295±0.00 0.459±0.00 2.928±1.33 1.390±0.00 2.612±0.00 1.860±0.00 2.152±0.00 1.932±0.00 2.713±0.00 3.129±0.80 2.094±0.90 2.466±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LK CIL_0002LK_0002 CGP 11:46385098-46594125

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111317 Ambra1-201 protein_coding Mus_musculus 0 5203
ENSMUST00000045699 Ambra1-004 protein_coding Mus_musculus 0 5188
ENSMUST00000099712 Ambra1-001 protein_coding Mus_musculus 0 2669
ENSMUST00000045705 Ambra1-002 protein_coding Mus_musculus 0 2540
ENSMUST00000111316 Ambra1-003 protein_coding Mus_musculus 0 2230
ENSMUST00000124132 Ambra1-005 processed_transcript Mus_musculus 0 1768
ENSMUST00000156496 Ambra1-007 processed_transcript Mus_musculus 0 1461
ENSMUST00000133490 Ambra1-006 processed_transcript Mus_musculus 0 682
ENSMUST00000142224 Ambra1-008 processed_transcript Mus_musculus 0 287

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