C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cholinergic receptor, nicotinic, alpha 6 (neuronal)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533810 CHRNA6-005 ENSG00000147434 9606 - 8:42756629-42796392 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungENST00000533810
Transcript ID Brain Lung
ENST00000533810 0.102±0.00 0.024±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002IT CIL_0002IT_0001 CGP 8:42697376-42796392

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0045211 IEA postsynaptic membrane
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034851 Chrna3-201 protein_coding Mus_musculus 2e-33 147

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