C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET pseudogene 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534163 SETP17-001 ENSG00000255222 9606 + 11:86294760-86295576 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000534163
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000534163 0.026±0.00 0.055±0.00 0.045±0.02 0.131±0.00 0.198±0.01 0.110±0.00 0.040±0.00 0.224±0.19 0.024±0.00 0.073±0.04 0.047±0.00 0.123±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102866 Set-001 protein_coding Mus_musculus 0 695
ENSMUST00000183511 Gm9531-001 transcribed_processed_pseudogene Mus_musculus 0 691
ENSMUST00000067996 Set-002 protein_coding Mus_musculus 0 684
ENSMUST00000125824 Set-005 processed_transcript Mus_musculus 0 684
ENSMUST00000134364 Set-004 protein_coding Mus_musculus 0 610
ENSMUST00000118921 Gm11877-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000121098 Gm12642-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000137291 Set-006 processed_transcript Mus_musculus 0 484
ENSMUST00000120258 Gm16420-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000149578 Set-003 protein_coding Mus_musculus 0 411
ENSMUST00000190284 RP24-492P7.1-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000055820 Gm9531-002 processed_transcript Mus_musculus 1e-35 154

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