C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, beta 4 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534999 CACNB4-003 ENSG00000182389 9606 - 2:151838626-151973940 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E4 CIL_0007E4_0001 CGP 2:151788984-152099079
CIL_0007E3 CIL_0007E3_0001 CGP 2:151832776-152175992

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005245 IDA:IEA voltage-gated calcium channel activity
GO:0005515 IPI:IEA protein binding
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0005891 IDA:IEA voltage-gated calcium channel complex
GO:0006810 TAS transport
GO:0007268 TAS synaptic transmission
GO:0007411 TAS axon guidance
GO:0008331 IDA high voltage-gated calcium channel activity
GO:0009898 TAS cytoplasmic side of plasma membrane
GO:0045202 IDA synapse
GO:0051899 TAS membrane depolarization
GO:0070588 IEA calcium ion transmembrane transport
GO:1901385 IMP regulation of voltage-gated calcium channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102760 Cacnb4-001 protein_coding Mus_musculus 0 2601
ENSMUST00000102761 Cacnb4-003 protein_coding Mus_musculus 0 2290
ENSMUST00000078324 Cacnb4-002 protein_coding Mus_musculus 0 2283
ENSMUST00000178799 Cacnb4-201 protein_coding Mus_musculus 0 2217
ENSDART00000149177 cacnb4b-005 nonsense_mediated_decay Danio_rerio 0 296
ENSDART00000089577 cacnb4b-004 protein_coding Danio_rerio 0 296

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