C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: complement component 1, r subcomponent
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000536053 C1R-004 ENSG00000159403 9606 - 12:7080421-7091892 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000536053
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000536053 219.436±0.00 176.893±0.00 10.694±0.00 4.560±2.83 37.739±23.49 76.931±68.41 13.888±10.74 76.089±29.54 120.471±106.68 33.138±20.03 8.650±5.89 152.665±129.76 44.711±8.95 84.192±61.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001H CIL_00001H_0001 CGP 12:6988259-7092607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068593 C1ra-201 protein_coding Mus_musculus 0 2019
ENSMUST00000184647 C1rb-001 protein_coding Mus_musculus 0 1982

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