C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000536306 ZCCHC8-003 ENSG00000033030 9606 - 12:122472870-122499325 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000536306
Transcript ID Adipose Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000536306 0.974±0.00 0.562±0.00 0.803±0.00 0.564±0.31 1.276±0.43 1.106±0.12 1.421±0.00 2.966±0.00 0.895±0.13 1.792±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZD CIL_0002ZD_0001 CGP 12:122271432-122500595
CIL_0002PD CIL_0002PD_0001 CGP 12:122472870-122527000

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 IC mRNA splicing, via spliceosome
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding
GO:0044822 IDA poly(A) RNA binding
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031376 Zcchc8-201 protein_coding Mus_musculus 0 1229

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