C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | regulatory factor X, 4 (influences HLA class II expression) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000536722  |
RFX4-005 |
ENSG00000111783 |
9606 | + |
12:106601166-106715527  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00028K | CIL_00028K_0001 | CGP | 12:106357658-106762803 |
| CIL_0007NZ | CIL_0007NZ_0001 | UCNEbase | 12:106418267-106672625 |
| CIL_0001MF | CIL_0001MF_0001 | CGP | 12:106582907-106889316 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000060397
|
Rfx4-003 | protein_coding | Mus_musculus | 0 | 885 |
|
ENSMUST00000095388
|
Rfx4-002 | protein_coding | Mus_musculus | 0 | 521 |
|
ENSMUST00000020226
|
Rfx4-001 | processed_transcript | Mus_musculus | 0 | 521 |
|
ENSMUST00000166696
|
Rfx4-006 | protein_coding | Mus_musculus | 0 | 521 |
|
ENSDART00000031752
|
rfx4-001 | protein_coding | Danio_rerio | 0 | 370 |
|
ENSMUST00000173479
|
Rfx4-004 | processed_transcript | Mus_musculus | 0 | 259 |
|
ENSMUST00000165868
|
Rfx4-005 | processed_transcript | Mus_musculus | 0 | 257 |
