C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aspartyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000537273 DARS-201 ENSG00000115866 9606 - 2:135907262-135985492 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000537273
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000537273 12.654±0.00 10.217±0.00 7.517±0.00 10.745±0.73 11.495±2.84 10.489±1.82 7.530±0.84 8.114±0.38 11.257±6.99 9.352±3.18 11.951±0.00 17.492±8.51 7.521±2.80 4.547±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NC CIL_0003NC_0001 CGP 2:135839626-135986100
CIL_00077L CIL_00077L_0001 CGP 2:135906677-136118165

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0004046 TAS aminoacylase activity
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004815 IEA aspartate-tRNA ligase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA:IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006412 TAS translation
GO:0006418 TAS:IEA tRNA aminoacylation for protein translation
GO:0006422 IEA aspartyl-tRNA aminoacylation
GO:0006461 TAS protein complex assembly
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027602 Dars-001 protein_coding Mus_musculus 0 1919
ENSDART00000102472 dars-201 protein_coding Danio_rerio 0 837
ENSMUST00000186398 Dars-002 retained_intron Mus_musculus 0 381
ENSDART00000130065 dars-202 protein_coding Danio_rerio 0 289

Loading