C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: fibrillin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000537463 FBN1-003 ENSG00000166147 9606 - 15:48430764-48645709 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000537463
Transcript ID Liver
ENST00000537463 12.443±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GC CIL_0008GC_0001 VISTA 15:48330070-48933845
CIL_0004NG CIL_0004NG_0001 CGP 15:48331011-48645849

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103234 Fbn1-003 protein_coding Mus_musculus 0 3432
ENSMUST00000028633 Fbn1-001 protein_coding Mus_musculus 0 3432
ENSMUST00000148272 Fbn1-002 retained_intron Mus_musculus 0 869
ENSMUST00000066157 Gm9913-201 protein_coding Mus_musculus 0 198

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