C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 60, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539409 FAM60A-002 ENSG00000139146 9606 - 12:31280584-31326116 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000539409
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000539409 5.520±0.00 8.693±0.00 1.169±0.00 3.634±0.00 4.918±0.00 2.441±0.00 5.061±0.00 0.995±0.06 12.169±0.00 0.703±0.48 7.879±3.22 3.597±0.00 3.929±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DK CIL_0003DK_0002 CGP 12:31280584-31591097

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016580 IDA Sin3 complex
GO:0030336 IMP negative regulation of cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081956 Fam60a-002 protein_coding Mus_musculus 0 586
ENSMUST00000054080 Fam60a-001 protein_coding Mus_musculus 0 586
ENSMUST00000111562 Fam60a-007 protein_coding Mus_musculus 0 462
ENSMUST00000165914 Gm9027-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000132696 Fam60a-006 protein_coding Mus_musculus 2e-33 148

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